| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4874 |
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| Symbol | |
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| ID | 5192548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5467587 |
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| End bp | 5468117 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640589359 |
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| Product | ATP-dependent protease peptidase subunit |
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| Protein accession | YP_001270178 |
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| Protein GI | 229328216 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.441904 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.192066 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACCACAA TCGTTTCTGT CCGCCGTAAC GGCAAAGTCG TCATGGGCGG CGACGGCCAG
GTATCCCTTG GCAACACCGT GATGAAAGGC AACGCCAAGA AGGTGCGCCG CCTGTACCAC
GGCCAGGTCA TCGCGGGCTT CGCCGGCGCC ACTGCCGACG CCTTCACCCT GTTCGAGCGC
TTTGAAGGTC AGCTGGAAAA ACACCAGGGC CACCTGGTAC GCGCCGCCGT CGAGCTGGCT
AAGGAATGGC GTACCGACCG CTCACTGAGC CGCCTGGAAG CCATGCTGGC CGTGGCCAAC
AAGGATGCAT CCCTGATCAT CACCGGCAAC GGTGACGTGG TCGAACCCGA AGATGGCCTG
ATCGCCATGG GTTCCGGCGG CGCCTATGCC CAGGCTGCAG CCCGTGCCCT GCTGAACAAG
ACCGACCTCT CGGCCCGCGA AATCGCCGAG ACCGCCCTGA ACATCGCCGG CGACATCTGC
GTGTTCACCA ACCACAACCT GACCATCGAG GAGCAGGACC TGGCCGACTG A
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| Protein sequence | MTTIVSVRRN GKVVMGGDGQ VSLGNTVMKG NAKKVRRLYH GQVIAGFAGA TADAFTLFER
FEGQLEKHQG HLVRAAVELA KEWRTDRSLS RLEAMLAVAN KDASLIITGN GDVVEPEDGL
IAMGSGGAYA QAAARALLNK TDLSAREIAE TALNIAGDIC VFTNHNLTIE EQDLAD
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