| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4872 |
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| Symbol | pyrB |
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| ID | 5192718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5464843 |
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| End bp | 5465847 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640589357 |
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| Product | aspartate carbamoyltransferase catalytic subunit |
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| Protein accession | YP_001270176 |
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| Protein GI | 148550074 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
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| TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.216485 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0344479 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCAA TCGACGCCAA GCGCCCGCTG CAGCTCAATG ATCAGGGCCA GCTGCGCCAC
TTCCTCTCGC TTGACGGTTT GCCTCGCGAA CTGCTCACCG AGATCCTCGA CACCGCCGAC
TCCTTCCTGG AAGTCGGTGC CCGGGCTGTG AAAAAAGTCC CGTTGCTGCG CGGCAAGACT
GTGTGCAACG TGTTCTTCGA GAACTCGACC CGTACCCGTA CCACCTTCGA ACTGGCAGCC
CAGCGCCTGT CGGCCGACGT GATCAGCCTG AACGTGTCGA CCTCCTCGAC CAGCAAGGGC
GAAACCCTGT TCGACACCCT GCGCAACCTC GAAGCCATGG CCGCCGACAT GTTCGTCGTA
CGCCACTCCG ACTCCGGCGC CGCGCACTTC ATCGCCGAGC ACGTGTGCCC GGAAGTGGCC
GTGATCAACG GCGGTGACGG CCGCCACGCG CACCCGACCC AGGGCATGCT CGACATGCTC
ACCATCCGCC GTCACAAAGG CAGCTTCGAA AACCTGTCCG TGGCGATCGT CGGCGACATC
CTGCACTCGC GTGTGGCCCG TTCCGACATG CTCGCGCTCA AAGCGCTGGG TTGCCCGGAC
ATCCGTGTGA TCGGGCCGAA AACCCTGATC CCGATCGGTA TCGAGCAGTA CGGCGTGAAG
GTCTACACCG ACCTCGCCGA AGGCCTGAAA GACGTCGACG TGGTGATCAT GCTGCGCCTG
CAGCGTGAGC GCATGGCCGG TGGCCTGCTG CCCAGTGAAG GCGAGTTCTA CCGCCTGTTC
GGCCTGACGA CCGCGCGCCT GGCCGGGGCC AAGCCTGACG CCATCGTCAT GCACCCGGGC
CCGATCAACC GTGGCGTAGA AATCGAGTCG GCGGTTGCCG ATGGCAAGCA CTCGGTGATC
CTCAACCAGG TCACCTACGG TATCGCCGTG CGCATGGCCG TGCTGTCCAT GGCCATGAGC
GGGCAGAACG CGCAACGTCA ATTGGACCAG GAGAATGCCC AGTGA
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| Protein sequence | MTPIDAKRPL QLNDQGQLRH FLSLDGLPRE LLTEILDTAD SFLEVGARAV KKVPLLRGKT
VCNVFFENST RTRTTFELAA QRLSADVISL NVSTSSTSKG ETLFDTLRNL EAMAADMFVV
RHSDSGAAHF IAEHVCPEVA VINGGDGRHA HPTQGMLDML TIRRHKGSFE NLSVAIVGDI
LHSRVARSDM LALKALGCPD IRVIGPKTLI PIGIEQYGVK VYTDLAEGLK DVDVVIMLRL
QRERMAGGLL PSEGEFYRLF GLTTARLAGA KPDAIVMHPG PINRGVEIES AVADGKHSVI
LNQVTYGIAV RMAVLSMAMS GQNAQRQLDQ ENAQ
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