Gene Pput_4869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4869 
Symbol 
ID5193184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5463268 
End bp5463837 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content64% 
IMG OID640589354 
Producthypothetical protein 
Protein accessionYP_001270173 
Protein GI148550071 
COG category[K] Transcription 
COG ID[COG1678] Putative transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0147719 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCC TCGCACCCAG CTACCTCAAG CACCAGTTCC TGATCGCCAT GCCGCACATG 
GCCGATCCGA ACTTCGCCCA GACCCTCACG TATATCGTCG AGCACAATGA GCATGGCGCC
ATGGGCCTGG TGGTCAACCG ACCACAGGAA CTGAGCCTGG CCGACATCCT CGAGCAGCTG
CGCCCGGACG AAACGCCGCC GGCCAGCACC TTGCAGGTGC CGATCTACCA GGGTGGCCCG
GTACAAACCG ACCGCGGCTT CGTGCTGCAC AGCAGCGAGT GCAGTTTCCA GGCCAGCGTG
GCGCTGGAAG GGCTGTCGCT GACCACGTCA CAGGACATAT TGCTGGCTAT CGCCGCCGGT
GTGGGCCCGA AACAGAGCCT GATCACCTTG GGCTATGCCG GTTGGGAAGC GGGCCAACTG
GAAGCGGAAC TGGCCGACAA CGCCTGGCTG AACTGCCCGT TCGACCCGGA AATCGTCTTC
GGTATGGCCA GCGACCTGCG CCTTGAGGCT GCGGCCGCCA GCCTGGGGAT CAACCTGCAC
CTGCTGACCA GCCAGGCGGG CCACGCCTGA
 
Protein sequence
MKTLAPSYLK HQFLIAMPHM ADPNFAQTLT YIVEHNEHGA MGLVVNRPQE LSLADILEQL 
RPDETPPAST LQVPIYQGGP VQTDRGFVLH SSECSFQASV ALEGLSLTTS QDILLAIAAG
VGPKQSLITL GYAGWEAGQL EAELADNAWL NCPFDPEIVF GMASDLRLEA AAASLGINLH
LLTSQAGHA