Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4869 |
Symbol | |
ID | 5193184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 5463268 |
End bp | 5463837 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640589354 |
Product | hypothetical protein |
Protein accession | YP_001270173 |
Protein GI | 148550071 |
COG category | [K] Transcription |
COG ID | [COG1678] Putative transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0147719 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACCC TCGCACCCAG CTACCTCAAG CACCAGTTCC TGATCGCCAT GCCGCACATG GCCGATCCGA ACTTCGCCCA GACCCTCACG TATATCGTCG AGCACAATGA GCATGGCGCC ATGGGCCTGG TGGTCAACCG ACCACAGGAA CTGAGCCTGG CCGACATCCT CGAGCAGCTG CGCCCGGACG AAACGCCGCC GGCCAGCACC TTGCAGGTGC CGATCTACCA GGGTGGCCCG GTACAAACCG ACCGCGGCTT CGTGCTGCAC AGCAGCGAGT GCAGTTTCCA GGCCAGCGTG GCGCTGGAAG GGCTGTCGCT GACCACGTCA CAGGACATAT TGCTGGCTAT CGCCGCCGGT GTGGGCCCGA AACAGAGCCT GATCACCTTG GGCTATGCCG GTTGGGAAGC GGGCCAACTG GAAGCGGAAC TGGCCGACAA CGCCTGGCTG AACTGCCCGT TCGACCCGGA AATCGTCTTC GGTATGGCCA GCGACCTGCG CCTTGAGGCT GCGGCCGCCA GCCTGGGGAT CAACCTGCAC CTGCTGACCA GCCAGGCGGG CCACGCCTGA
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Protein sequence | MKTLAPSYLK HQFLIAMPHM ADPNFAQTLT YIVEHNEHGA MGLVVNRPQE LSLADILEQL RPDETPPAST LQVPIYQGGP VQTDRGFVLH SSECSFQASV ALEGLSLTTS QDILLAIAAG VGPKQSLITL GYAGWEAGQL EAELADNAWL NCPFDPEIVF GMASDLRLEA AAASLGINLH LLTSQAGHA
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