| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4865 |
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| Symbol | |
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| ID | 5193736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5460100 |
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| End bp | 5460465 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640589350 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_001270169 |
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| Protein GI | 148550067 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.321258 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0275279 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCCGAG TTCTGATTGT CGACGACTCG CCGACAGAGA TGTACAGATT GACCGAATGG
CTGGAAAAGC ACGGCTACCA GGTGCTCAAG GCCAGCAACG GTGCCGACGG CGTGGCCCTG
GCCCGGCAGG ACAAGCCCGA CGCGGTGCTG ATGGACATCG TCATGCCTGG CATGAACGGT
TTCCAGGCCA CCCGCCAGCT CAGCAAGGAC CCGGACACCA GCGCTATTCC AGTGATCGTG
GTAACCACCA AGGACCAGGA AACCGACCGT ATCTGGGCCA CGCGCCAGGG TGCCCGTGAC
TTCCTGACCA AACCGGTGGA AGAGGAGGCG CTGATCGCCA AGCTCAAAGA AGTGCTGGGG
GCTTGA
|
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| Protein sequence | MARVLIVDDS PTEMYRLTEW LEKHGYQVLK ASNGADGVAL ARQDKPDAVL MDIVMPGMNG
FQATRQLSKD PDTSAIPVIV VTTKDQETDR IWATRQGARD FLTKPVEEEA LIAKLKEVLG
A
|
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