Gene Pput_4864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4864 
Symbol 
ID5193735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5459549 
End bp5460103 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content67% 
IMG OID640589349 
Productputative CheW protein 
Protein accessionYP_001270168 
Protein GI148550066 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0316337 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCACCC GCCCGCAAGG CGCGTCGCTG ACCGCCTTTG AGTTGTTGCT GGACATCGAC 
CGGCGCTGTC GCCTGCTGGT TGCCGACCAG CCGCCGCAGG ACAACCGCGT GCAGCAGTGG
AGCGGCATTG GCTTTCGCAT TGCCGGGCAG TGGTTCGTCG CGCCCATGGG CGAAGTGGCC
GAGGTGCTGC GCGAACCGCG CAGTAGCCGC GTCCCCGGCG TGCAGCCGTG GGTGTGCGGG
GTGGCCAACC TGCGTGGCCG GCTGTTGCCG GTGATGGACC TGAGCTGCTT CTTCGGCCTG
GGCCACGCCG CACCGGGCAA GCAGCGGCGA GTGCTGGTGC TGGATCACGA CGACCTGTTC
GTCGGCTTGC TGGTCGACGA GGTGCTGGGC CTTCAGCACT TTGCCCTCGA CAGCCTGCAG
CTGTCGCCGC CGCAGCCTCT GATCCTTGCC GCTGCGCGCT TTGTGCAGGG GTATTTTCCG
CGTGAACGTA ACTGGGCGAT CTTCAGCCCC TTTGCCTTGG CCCAGGCGCC AGGCTTTCTC
GATGTGGCGT TATAG
 
Protein sequence
MTTRPQGASL TAFELLLDID RRCRLLVADQ PPQDNRVQQW SGIGFRIAGQ WFVAPMGEVA 
EVLREPRSSR VPGVQPWVCG VANLRGRLLP VMDLSCFFGL GHAAPGKQRR VLVLDHDDLF
VGLLVDEVLG LQHFALDSLQ LSPPQPLILA AARFVQGYFP RERNWAIFSP FALAQAPGFL
DVAL