Gene Pput_4861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4861 
Symbol 
ID5191235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5452058 
End bp5452531 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content66% 
IMG OID640589346 
ProductCheW domain-containing protein 
Protein accessionYP_001270165 
Protein GI148550063 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0149228 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGAAC TGATTTCCGG CCAACGCAGC AGCCTGACCG GGCTGTTGCT ACCGTTGGGG 
GACCGCACGC TGGTGTTGCC CAACGTGGCG GTGGCCGAGT TGAGCGGGCA GCGTAACCTG
GTGTGCCAGC ATGGCGACCC CGCCTGGCAC CTGGGGTGGA TCAACTGGCG TCAGCAACGC
CTGCCGTTGA TCGGTTTCGA GGCCGCGTGC GGTGGTGAGA CGCCGTGCGG GGAGCGGGCT
CGCGTGGTGG TGCTCAATGC TTTGGGCGAT ACCGGTTTGC GGTACCTGGC GCTGTTGCTG
CAGGACATTC CGCGCTCGTG CAAGCTCGAC AGCCAGCTGA ACTACGTGGA TGTGGCGCTG
GGCAGGTTGG AGCTGGCGGC GGTGCAGGTG GGTGAGCAGG TGGCGCGGGT GCCGGACCTG
GTCGCGCTTG AGCGCTTGGT GCGTGACGCG GAGCTGCAAC CTGACCTTGG TTAG
 
Protein sequence
MLELISGQRS SLTGLLLPLG DRTLVLPNVA VAELSGQRNL VCQHGDPAWH LGWINWRQQR 
LPLIGFEAAC GGETPCGERA RVVVLNALGD TGLRYLALLL QDIPRSCKLD SQLNYVDVAL
GRLELAAVQV GEQVARVPDL VALERLVRDA ELQPDLG