Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4843 |
Symbol | |
ID | 5192995 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 5432808 |
End bp | 5433266 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640589328 |
Product | cytochrome c, class II |
Protein accession | YP_001270147 |
Protein GI | 148550045 |
COG category | [C] Energy production and conversion |
COG ID | [COG3909] Cytochrome c556 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.250644 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGAAGC GATTGACCGT TGTTCTGCTG GCTGCACTTG CCCTGGTAGG GGCTTTGACG GGGTGTGACC GGGTTGACCC GAACTCGCCG CTGGGTAAAC GCAAGGTGAT CTTCAAGGAC ATGCTCAAGA CCAGCGAAGA CCTGGGTGGC ATGCTGCGTG GCCGGTTGCC GTTCGACGGG GTGAAGTTTG CCGACGGTGC GCTGAAGCTG GACAGCCTGT CGCATCAGCC GTGGCAGCAT TTTCCACAGG TGCGCGATGG TGGTGACAGC GCCGCCCGCG CCGAAGTGTG GGAGCGCCAG GCGCGGTTCC ATGACCTGGC CCGGCAGCTT GAGGGCGTCA CCGGCGAACT GGTCGATGTC ACCCGCAATC AGCCACTGGA TGCTGCGCAA CTGAAGGCGC CGATGGACAA GGTCGAGTCT GCGTGCAAGG CCTGTCATAA CGAATTTCGT AATCATTGA
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Protein sequence | MLKRLTVVLL AALALVGALT GCDRVDPNSP LGKRKVIFKD MLKTSEDLGG MLRGRLPFDG VKFADGALKL DSLSHQPWQH FPQVRDGGDS AARAEVWERQ ARFHDLARQL EGVTGELVDV TRNQPLDAAQ LKAPMDKVES ACKACHNEFR NH
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