| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4838 |
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| Symbol | |
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| ID | 5192695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5425714 |
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| End bp | 5427711 |
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| Gene Length | 1998 bp |
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| Protein Length | 665 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640589323 |
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| Product | transketolase |
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| Protein accession | YP_001270142 |
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| Protein GI | 148550040 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAGCC GTCGTGAACG TGCCAACGCC ATTCGTGCCC TCAGCATGGA TGCCGTGCAA
AAGGCCAACA GCGGCCACCC AGGTGCCCCC ATGGGCATGG CGGATATCGC CGAAGTGCTT
TGGCGCGACT ACCTGAAGCA CAACCCGAGC AACCCGAGCT TCGCCGACCG TGACCGCTTC
GTGCTGTCCA ACGGCCACGG TTCGATGCTG ATCTACTCGC TGCTGCACCT GACCGGCTAC
GACGTCACCA TCGATGACAT CAAAGGCTTC CGCCAGCTGC ACAGCCGCAC CCCGGGCCAC
CCGGAGTACG GCTACACCCC AGGCGTTGAA ACCACCACCG GCCCGCTCGG CCAGGGTATC
GCCAACGCCG TGGGCTTCGC CCTGGCAGAA AAAGTACTGG CTGCCCAGTT CAACCGTGAC
GGCCACACCA TCGTCGACCA CAACACCTAC GTGTTCCTCG GCGACGGCTG CATGATGGAA
GGTATCTCCC ATGAAGTCGC CTCGCTGGCC GGCACCCTGG GCCTGAACAA GCTGATCGCC
TTCTACGATG ACAATGGCAT CTCCATCGAC GGCGAAGTGC ACGGCTGGTT CACCGACAAC
ACCCCGGCGC GCTTCGAAGC CTACAACTGG CAGGTGATCC GCAACGTCGA CGGCCACGAT
GCCGAAGAAA TCAAGATGGC CATCGAGACC GCCCGCAAGA GCGATCGCCC GACCCTGATC
TGCTGCAAGA CCACCATCGG TTTCGGTTCG CCGAACAAGC AGGGCAAGGA AGACTGCCAC
GGTGCCCCGC TGGGCAACGA CGAAATCGCC CTGACCCGCC AGGCCCTGAA CTGGAACCAC
GGCCCGTTCG AAATCCCGGC CGACATCTAC GCCGAGTGGG ATGCCAAGGC CGCCGGTGCC
AAGGTTGAAG CCGAGTGGAA CCAGCGCTTC GACGCCTACG CCAAGGCCTA CCCGGAGCTG
GCTGCCGAGT TCAAGCGCCG TGCCAGCGGC GAGCTGCCGG CCGACTTCAG CGAAAAGGCC
CAGGCCTACA TCAATGAAGT GGCTGCCAAA GGCGAAACCA TCGCCAGCCG CAAGGCCAGC
CAGAACGCCC TGAACGCCTT CGGCCCGCTG CTGCCCGAGT TCCTCGGTGG TTCGGCCGAC
CTGGCCGGCT CCAACCTGAC CCTGTGGAAA GGTTGCAAGG GCGTCGAAGC CAATGACGCC
AGCGGCAACT ACGTGTTCTA CGGCGTGCGC GAGTTCGGCA TGACCGCCAT CATGAACGGC
GTTGCCCTGC ACGGTGGCCT GGTGCCTTAC GGCGCGACCT TCCTGATGTT CATGGAATAC
GCCCGCAACG CCGTGCGCAT GTCGGCCCTG ATGAAGCAGC GCGTGATCCA CGTGTACACC
CACGACTCCA TCGGTCTGGG CGAAGACGGC CCGACGCACC AGCCGATCGA GCAGCTGACC
AGCCTGCGCA GCACCCCGAA CCTGGACACC TGGCGCCCGG CCGACGCGGT GGAATCCGCC
GTGTCCTGGA AAAACGCCCT GGAGCGCAAG GACGGCCCAT CGGCGCTGAT CTTCTCGCGC
CAGAACCTGC AGCACCAGGA CCGCGATGCC CAGCAGATCG CCGACATCAG CCGCGGTGGC
TATGTGCTCA AGGACTGCGC CGGCGAGCCT GAACTGATTC TGATCGCCAC CGGTTCCGAA
GTGGGCCTGG CTGTTCAGGC CTTCGACAAG CTGACCGAGC AAGGCCGCAA GGTGCGCGTG
GTTTCCATGC CGTGCACCAG CGTGTTCGAT GCCCAGGACG CTGCCTACAA GCAGTCCGTG
CTGCCGCTGG AAGTCGGTGC GCGCATCGCC ATCGAAGCTG CCCACGCTGA CTTCTGGTAC
AAGTACGTCG GCCTGGAAGG TCGTATCATC GGCATGACCA CCTACGGTGA GTCGGCGCCG
GCTTCGGCAT TGTTCGAAGC GTTCGGCTTC ACCCTGGAGA ACATCCTCGG TACTGCCGAA
GAGCTGCTGG AAGACTGA
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| Protein sequence | MPSRRERANA IRALSMDAVQ KANSGHPGAP MGMADIAEVL WRDYLKHNPS NPSFADRDRF
VLSNGHGSML IYSLLHLTGY DVTIDDIKGF RQLHSRTPGH PEYGYTPGVE TTTGPLGQGI
ANAVGFALAE KVLAAQFNRD GHTIVDHNTY VFLGDGCMME GISHEVASLA GTLGLNKLIA
FYDDNGISID GEVHGWFTDN TPARFEAYNW QVIRNVDGHD AEEIKMAIET ARKSDRPTLI
CCKTTIGFGS PNKQGKEDCH GAPLGNDEIA LTRQALNWNH GPFEIPADIY AEWDAKAAGA
KVEAEWNQRF DAYAKAYPEL AAEFKRRASG ELPADFSEKA QAYINEVAAK GETIASRKAS
QNALNAFGPL LPEFLGGSAD LAGSNLTLWK GCKGVEANDA SGNYVFYGVR EFGMTAIMNG
VALHGGLVPY GATFLMFMEY ARNAVRMSAL MKQRVIHVYT HDSIGLGEDG PTHQPIEQLT
SLRSTPNLDT WRPADAVESA VSWKNALERK DGPSALIFSR QNLQHQDRDA QQIADISRGG
YVLKDCAGEP ELILIATGSE VGLAVQAFDK LTEQGRKVRV VSMPCTSVFD AQDAAYKQSV
LPLEVGARIA IEAAHADFWY KYVGLEGRII GMTTYGESAP ASALFEAFGF TLENILGTAE
ELLED
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