| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4837 |
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| Symbol | |
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| ID | 5192908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5424462 |
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| End bp | 5425523 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640589322 |
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| Product | D-erythrose-4-phosphate dehydrogenase |
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| Protein accession | YP_001270141 |
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| Protein GI | 148550039 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR01532] D-erythrose-4-phosphate dehydrogenase
[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCACC CGCGTCCCTA CAAAGTTGCA CTCAACGGTT ATGGCCGTAT CGGCCGCTGT
GTCCTGCGCG CGCTGTTCGA GCGGGGGGCA AAGGCCGGTT TCGAGATCGT CGCGCTGAAC
GATCTGGCCG ATCAGGCCAG CCTGGAATAC CTGACACGCT TCGACTCCAC CCACGGGCGT
TTTCCCGGCG AGGTCAAGGT CGACGGCGAC TGTCTGCACA TCAATGGCGA TTGCGTGAAG
GTAATGCGCA GTGCCACCCC CGAAGGCATC GACTGGGCTG CGCTGGGCAT CGACCTGGTG
CTGGAGTGTT CCGGTGCCTA TAACACCCGT GCCGATGGCC AGCGTTTCCT CGACGCCGGT
GCGCCAAGGG TGCTGTTCTC GCAGCCCATG GCCAGCGAGG CCGACGTTGA CGCCACGGTG
GTCTACGGCA TCAACCAGGC CTGCCTTACC GGCAGCGAGC GCCTGGTGTC CAACGCCTCG
TGCACCACCA ACTGCGGCGT GCCGCTGCTG CGTGTGCTGG ACCAGGCGTT CGGCATCGAA
TATGTGCAGA TCACCACCAT CCACTCGGCG ATGAACGACC AGCCGGTGAT CGATGCCTAT
CACCACGAAG ACCTGCGCCG CACGCGTTCG GCCTTCCAGT CGGTGATTCC TGTGTCCACT
GGCCTGGCGC GTGGCATCGA GCGCCTGCTT CCGGAACTTG CCGGGCGAAT CCAGGCCAAA
GCGGTACGTG TACCGACCGT CAACGTCTCG TGCCTGGACA TCACCCTGCA GACTGCCCGC
GACACCAGTG CGGCCGAAGT CAACCGAGTG CTGCGCGAGG CTGCGCTGGA AGGTCCGCTT
AAAGGCTTGC TGGCTTACAC CGAGCTGCCG CACGCCAGTT GTGATTTCAA CCATGACCCA
CATTCGGCGA TCGTCGATGC CAGCCAGACG CGTGTTTCCG GGCCCCGCCT GGTAAACCTG
CTGGCGTGGT TCGACAACGA ATGGGGTTTT GCCAACCGTA TGCTCGACGT TGCCGAACAC
TTTCTGCACG TCGTTCACCC AACCCGCAAC AAACAGCCCT GA
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| Protein sequence | MPHPRPYKVA LNGYGRIGRC VLRALFERGA KAGFEIVALN DLADQASLEY LTRFDSTHGR
FPGEVKVDGD CLHINGDCVK VMRSATPEGI DWAALGIDLV LECSGAYNTR ADGQRFLDAG
APRVLFSQPM ASEADVDATV VYGINQACLT GSERLVSNAS CTTNCGVPLL RVLDQAFGIE
YVQITTIHSA MNDQPVIDAY HHEDLRRTRS AFQSVIPVST GLARGIERLL PELAGRIQAK
AVRVPTVNVS CLDITLQTAR DTSAAEVNRV LREAALEGPL KGLLAYTELP HASCDFNHDP
HSAIVDASQT RVSGPRLVNL LAWFDNEWGF ANRMLDVAEH FLHVVHPTRN KQP
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