| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4828 |
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| Symbol | |
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| ID | 5193026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5416814 |
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| End bp | 5417512 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640589313 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001270132 |
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| Protein GI | 148550030 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.425372 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGCAA CACCTTCCCC GGGTCACGCC AAGCTACGCC TGGTGGCCGA CAACTGGCCA
CCGTTCACCG ATGCCAAGAT GCCGGGCGGC GGCCTTGCGA CCAGCATCGT TACCACGGCA
CTGGCGCGTG CCGGCTACGC CAGCGGCTAT GAAGAGGTGC CGTGGGCGCG TGCGTTGCTG
GGGGTAGGTG AAGGGCGCTA CGACGTGCTG ATCAATGCCT GGTACAACGA CTCGCGCGCC
AATATCGGGC AATTCTCCAG CGCCTACCTG AGTAATCGTA TTCGCCTGCT GCAGCGTAAG
GGCGAGGCGT TTAGCTACAA GCGTCTGTCT GACCTTTATG CCTATAGCAT TGCCGTAGTG
CGTGATTACG CCTATTCACC GGAATTCGAC GGGGATCCCC GTCTGCACAA AGTGCCGGTG
CGCAACTTTT CTTCTGCGGT ACGCATGTTG GCGGCAGGGC GGGTAAGCCT GGCGGTGGAA
GACGAGTACG TGGCCCGCTA CAACCTGCAG CGTGAGCCGC AGGATGTGCG TGATGGGGTG
ATGCTGGTGG ATCCGCCGCT GGGGGAGAAC ACCCTGCATA TTCTGGTCAG CCTGAAGCAC
CCGGAGCATG ATCGGATCGT CGAGCGCTTC GAGCAGGCGA TAGCGGCGAT GAAGGCCGAT
GGCAGCTATG CCCGGCTGCT GCGTCAGTAT GGCTTTTGA
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| Protein sequence | MLATPSPGHA KLRLVADNWP PFTDAKMPGG GLATSIVTTA LARAGYASGY EEVPWARALL
GVGEGRYDVL INAWYNDSRA NIGQFSSAYL SNRIRLLQRK GEAFSYKRLS DLYAYSIAVV
RDYAYSPEFD GDPRLHKVPV RNFSSAVRML AAGRVSLAVE DEYVARYNLQ REPQDVRDGV
MLVDPPLGEN TLHILVSLKH PEHDRIVERF EQAIAAMKAD GSYARLLRQY GF
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