Gene Pput_4826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4826 
Symbol 
ID5192369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5413219 
End bp5414400 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content64% 
IMG OID640589311 
Producthypothetical protein 
Protein accessionYP_001270130 
Protein GI148550028 
COG category[R] General function prediction only 
COG ID[COG2081] Predicted flavoproteins 
TIGRFAM ID[TIGR00275] flavoprotein, HI0933 family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.270305 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACTCCA CCGACGTGAT CATCCTTGGC GCCGGCGCCG CCGGCCTGAT GTGCGCCCAG 
CTCAGTGCCC GTCGCGGCCG CCGGGTGCTG CTGCTCGACC ACGCCAACAA GCCAGGCAAG
AAAATCCTCA TGTCCGGCGG CGGGCGTTGC AACTTCACCA ACCTGTACAC CGAGCCGGCC
AACTTCCTTT CGCACAACGC GCACTTCTGC AAGTCGGCCC TGGCCCGCTA CACCCAGTGG
GACTTCATCG AACTGGTGTG CAAGCACGGC GTGGCGTACC ACGAGAAGAA GCTCGGCCAG
CTGTTCTGTG ACAACAAGGC CAGCGACATC CTCGACATGC TGCTGGCCGA GTGCGACGAG
GCCGGTGCCG AGATCCGCAT GCACACCAGC ATCGAACAGA TCGAGAAGAC CGAAAGCGGC
TACCTGCTGC AGACCAGCGG CGGCCAGTTC ACCTGCCAGT CGCTGGTCAT CGCCACTGGC
GGCCTGTCGA TCCCGACCCT GGGCGCCACC GGTTTCGGCT ACCAGGTGGC CCGTCAGTTC
GGCCACACCC TGCTGCCAAC CCGCGCCGGG CTGGTGCCAT TCACCATCAC TGAGCCCCAA
CTCAAGGCGA TGTGCACCGA ATTGTCCGGC ACCTCACTGG ACTGCACCGC CAGCTGCAAT
GGCACCAGCT TCCGCGAAAA CCTGCTGTTC ACGCACCGCG GCCTGAGCGG CCCGGCGATC
TTGCAGATCT CGTCGTTCTG GGAAGCCGGT GACACGGTCG AGATCAACCT GCTGCCCGAC
CGGGATGCGC TTTCCTGGCT GCAACAGATG CAGGCCGAGC GCGCCAATGC CGAACTGAAG
ACCGTGCTGG GCGAGGTGTT CACCCGCAAG CTGGCTAACT TGCTGGCCGA GCAGTGGTTC
GAATCGAAGC CGATGAAGCA GTACACACCG GCGGAACTGG CGCACATCGC CGAAAAGCTG
GCGAACTGGC AAGTGGTGCC AGCCGGCACC GAAGGCTACC GCACCGCCGA AGTGACCCTG
GGCGGCGTGG ATACCCGCGA GGTGTCGTCC AAGACCATGG AGTCGCTGAA AAGCCCCGGT
TTGTACTTCA TCGGTGAAGT GCTGGATGTC ACCGGCCACC TGGGCGGTTT CAACTTCCAG
TGGGCCTGGG CATCGGCGAA CGCCGCCGCG CAGTTCGTGT AG
 
Protein sequence
MHSTDVIILG AGAAGLMCAQ LSARRGRRVL LLDHANKPGK KILMSGGGRC NFTNLYTEPA 
NFLSHNAHFC KSALARYTQW DFIELVCKHG VAYHEKKLGQ LFCDNKASDI LDMLLAECDE
AGAEIRMHTS IEQIEKTESG YLLQTSGGQF TCQSLVIATG GLSIPTLGAT GFGYQVARQF
GHTLLPTRAG LVPFTITEPQ LKAMCTELSG TSLDCTASCN GTSFRENLLF THRGLSGPAI
LQISSFWEAG DTVEINLLPD RDALSWLQQM QAERANAELK TVLGEVFTRK LANLLAEQWF
ESKPMKQYTP AELAHIAEKL ANWQVVPAGT EGYRTAEVTL GGVDTREVSS KTMESLKSPG
LYFIGEVLDV TGHLGGFNFQ WAWASANAAA QFV