| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4818 |
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| Symbol | |
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| ID | 5191829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5398366 |
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| End bp | 5399844 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640589303 |
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| Product | sodium/proline symporter |
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| Protein accession | YP_001270122 |
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| Protein GI | 148550020 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02121] sodium/proline symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.88778 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAATC CACTAACGAT CACCTTCGTG ATCTACATCG CAGCAATGGT GCTGATCGGC
TTCGCCGCCT ATCGCGCTAC CAACAACCTT TCCGATTACA TTCTGGGCGG TCGCAGCCTC
GGTAGCGTGG TTACCGCGCT GTCTGCCGGT GCCTCCGACA TGAGTGGCTG GCTGCTGATG
GGCCTGCCTG GTGCCATCTA CTTCGCGGGC CTGTCCGAGG CCTGGATCGC CATCGGCCTG
ACAGTGGGTG CCTACCTGAA CTGGCTGTTC GTGGCCGGCC GGCTGCGCGT GCAGACCGAG
CACAACGGTG ACGCGCTGAC CCTGCCGGAC TACTTCTCCA GCCGTTTCGA AGACAATAGC
GGGCTGCTGC GTATCATTTC CGCCATCGTC ATCCTGGTGT TCTTCACCAT CTACTGTGCC
TCCGGCATCG TGGCCGGTGC CCGTCTGTTC GAGAGCACCT TCGGCATGTC GTACGAAACC
GCTTTGTGGG CTGGTGCAGC GGCGACCATC GCCTACACCT TCGTGGGTGG CTTCCTGGCG
GTGAGCTGGA CCGATACCGT ACAGGCTTCG CTGATGATCT TCGCGCTGAT CCTGACCCCG
GTAATCGTGC TGATCTCCAC CGGTGGCTTC GACCAGACCT TCGCCGCTAT CGAGGCGGTG
AACCCGGCGA ACTTCGACAT GCTCAAAGGT GCCACCTTCA TCGGCATCAT CTCGCTGATG
GGCTGGGGCC TGGGTTACTT CGGCCAGCCG CATATCCTGG CGCGCTTCAT GGCCGCTGAT
TCGGTGAAGT CCATCGCCAA GGCGCGCCGC ATTTCCATGA CCTGGATGAT CCTGTGCCTG
GCGGGTACCT GCGCCGTTGG CTTCTTCGGC ATCGCCTACT TCTCGGCTCA TCCTGAACTG
GCAGGCCCGG TTAGCGAGAA CCACGAACGT GTGTTCATCG AGCTGGCCAA GATCCTGTTC
AACCCATGGA TTGCGGGTGT CCTGCTGTCG GCCATCCTGG CCGCAGTCAT GAGCACCCTG
AGCTGCCAGC TGCTGGTGTG CTCCAGTGCC CTGACCGAAG ACTTCTACAA AGCCTTCCTG
CGCAAGAATG CTTCGCAGGT CGAACTTGTG TGGGTCGGCC GTCTGATGGT GCTGGCCGTG
GCCCTGATCG CCATCGCCAT GGCCGCCAAC CCGGAAAACC GCGTGCTGGG CCTGGTGGCC
TATGCCTGGG CCGGCTTCGG TGCCGCCTTC GGCCCGGTGG TGCTGATTTC GGTGCTGTGG
AAAGGCATGA CCCGTAACGG TGCGCTGGCC GGTATCGTGG TGGGTGCGCT GACGGTGATC
CTGTGGAAGA ACTTCGACAC CCTCGGGTTG TACGAAATCA TCCCTGGCTT CCTGTTCGCC
AGCATCGCCA TTGTTCTGGT GAGCAAGCTG GGCAGCCCTT CGCAGGCGAT GGTCAAGCGC
TTCGAAGCAG CTGATGCGGC GTATCACGCC GACAAGTAA
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| Protein sequence | MGNPLTITFV IYIAAMVLIG FAAYRATNNL SDYILGGRSL GSVVTALSAG ASDMSGWLLM
GLPGAIYFAG LSEAWIAIGL TVGAYLNWLF VAGRLRVQTE HNGDALTLPD YFSSRFEDNS
GLLRIISAIV ILVFFTIYCA SGIVAGARLF ESTFGMSYET ALWAGAAATI AYTFVGGFLA
VSWTDTVQAS LMIFALILTP VIVLISTGGF DQTFAAIEAV NPANFDMLKG ATFIGIISLM
GWGLGYFGQP HILARFMAAD SVKSIAKARR ISMTWMILCL AGTCAVGFFG IAYFSAHPEL
AGPVSENHER VFIELAKILF NPWIAGVLLS AILAAVMSTL SCQLLVCSSA LTEDFYKAFL
RKNASQVELV WVGRLMVLAV ALIAIAMAAN PENRVLGLVA YAWAGFGAAF GPVVLISVLW
KGMTRNGALA GIVVGALTVI LWKNFDTLGL YEIIPGFLFA SIAIVLVSKL GSPSQAMVKR
FEAADAAYHA DK
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