| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4800 |
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| Symbol | |
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| ID | 5191936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5378055 |
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| End bp | 5379326 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640589285 |
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| Product | 3-deoxy-D-manno-octulosonic-acid transferase |
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| Protein accession | YP_001270104 |
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| Protein GI | 148550002 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1519] 3-deoxy-D-manno-octulosonic-acid transferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0184393 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGAA CTCTCTATAC CTTGCTGTTT CACCTGGGCC TGCCGCTGGT TGCGCTGCGC
CTATACCTGC GCGCGCGCAA GGCGCCGGCC TATGGCCAGC GCATCGGCGA GCGCTTTGCT
TTCAAGCTGC CGGCCATGCG CCAGGGTGGT ATCTGGGTAC ATGCGGTATC GGTGGGCGAG
AGCATTGCTG CCGCACCCAT GGTGCGTGCC TTGCTCAAGG CTTACCCGGA GCTGCCGATC
ACACTGACCT GCATGACCCC TACTGGCTCT GAACGCATTC GCGCCCTGTT CGCCAACGAG
CCACGCGTGC AGCATTGCTA CCTGCCCTAC GACCTGCCTT GGGCGGCGGG GCGTTTTCTC
GATCATGTGC AGCCTAAGCT GGGCATCATC ATGGAAACCG AGCTTTGGCC CAACCACATT
CACCAGTGTG CCAGGCGCGG CATTCCGGTG GCGCTGGCCA ATGCGCGCTT GTCTGAGCGC
TCGGCCCGTG GCTATGGGCG CTTTGCCAGG CTGACCCGGC CGATGCTGGC CGAGATGAGC
CTGATTGCCG TGCAGACCGA AACCGAGGCC CAGCGCTTCC GTGACCTGGG TGCACGCCCT
GAGCGTGTGC AAGTCACCGG TTCGATCAAG TTCGACCTGA CGATCGACGA ACAGCTGCTG
CCGCGCGCCA GGGCATTGCG TGAACAGTGG GGGGGAGGCC AGCGCCCTGT GTGGATCGCC
GCCAGCACCC ACGACGGTGA AGATGCCTTG ATCCTGCAGG CGCATCGGCA GTTGTTGCAG
GTGCATGGCG ATGCCTTGCT GATCCTGGTG CCGCGCCATC CCGAGCGCTT CAATGCAGTG
CATGCGTTGT GCAGCGAGCA GTTCACCACC GTGCGCCGCT CTGCCGGCAC GCTGGTCGAT
GCGCAAACGC GGGTATTGCT GGGCGACACC ATGGGCGAAC TGCTGTTCCT GTATGCCCTG
GCCGACATTG CCTTCGTCGG TGGCAGCCTG GTGCCGACCG GTGGGCACAA TCCGTTGGAG
CCTGCGGCGC TGGCCTTGCC GGTGCTCATG GGGCCGCATG TGTTCAACTT CCTCGAAATC
AGCGCGATGC TGCGCGAGGC GGGTGCGTTG CAGCAGGTGG ATGATGCTGA CGGGCTGGCC
GGTGCGGTGC GCCGTCTGGT GGAACTGCCG CAGGACGCCC AGCGCATGGG CGAGGCGGGC
AGGGCGGTGA TGCGGGCCAA TCAGGGGGCT TTGCAGCGAT TGCTCGAGGG GCTGGGGGCG
CTTATCCGCT GA
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| Protein sequence | MNRTLYTLLF HLGLPLVALR LYLRARKAPA YGQRIGERFA FKLPAMRQGG IWVHAVSVGE
SIAAAPMVRA LLKAYPELPI TLTCMTPTGS ERIRALFANE PRVQHCYLPY DLPWAAGRFL
DHVQPKLGII METELWPNHI HQCARRGIPV ALANARLSER SARGYGRFAR LTRPMLAEMS
LIAVQTETEA QRFRDLGARP ERVQVTGSIK FDLTIDEQLL PRARALREQW GGGQRPVWIA
ASTHDGEDAL ILQAHRQLLQ VHGDALLILV PRHPERFNAV HALCSEQFTT VRRSAGTLVD
AQTRVLLGDT MGELLFLYAL ADIAFVGGSL VPTGGHNPLE PAALALPVLM GPHVFNFLEI
SAMLREAGAL QQVDDADGLA GAVRRLVELP QDAQRMGEAG RAVMRANQGA LQRLLEGLGA
LIR
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