| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4789 |
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| Symbol | |
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| ID | 5194902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5365621 |
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| End bp | 5366139 |
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| Gene Length | 519 bp |
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| Protein Length | 172 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640589274 |
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| Product | hypothetical protein |
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| Protein accession | YP_001270093 |
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| Protein GI | 148549991 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3577] Predicted aspartyl protease |
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| TIGRFAM ID | [TIGR02281] clan AA aspartic protease, TIGR02281 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0567723 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGG CGCCGGGCAA GCGCGCGGGC AAGTTGCTGA TGATCGTCGC TTGGGCGGCG
GCGCTGTTTC TTGCCACGCG TTTTTTCGGC CAGTGGGAAG ACAGCCAGCG TAATCCCAAC
AGCCAGGTGC AATCCGAACA TGGTCAAGGC TTTATCGAAG TGCGCCTGCT GAGTAATGGC
CAGGGCCACT TCGTGGTGGA TGGTGCCATC AACGGCCAGG TGGTGCATTT CATGCTCGAC
ACCGGCGCCA CCGATGTGGC GATCCCGGAG GCGTTGGCTC ATGAACTGAG CCTGGAGCGC
GGTAGCCCGG TGCTACTGAG CACCGCCAAC GGCCGCACCG AAGGCTACCG CACGCGCCTG
ACCAGCCTGC AACTGGGCGA TATCCGCCTG CAGAACGTAC GCGCCATCGT GGTGCCGGGC
CTGGATGGGT CCACCGTACT GCTGGGTATG AGTGCCCTGC AACAACTTGA ATTTACCCAG
CGCGGTGGCA CCATGCTGCT GCGCCAGAAC CTGAAATGA
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| Protein sequence | MSQAPGKRAG KLLMIVAWAA ALFLATRFFG QWEDSQRNPN SQVQSEHGQG FIEVRLLSNG
QGHFVVDGAI NGQVVHFMLD TGATDVAIPE ALAHELSLER GSPVLLSTAN GRTEGYRTRL
TSLQLGDIRL QNVRAIVVPG LDGSTVLLGM SALQQLEFTQ RGGTMLLRQN LK
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