Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4785 |
Symbol | |
ID | 5195055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 5359253 |
End bp | 5360467 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640589270 |
Product | phosphoserine phosphatase SerB |
Protein accession | YP_001270089 |
Protein GI | 148549987 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0560] Phosphoserine phosphatase |
TIGRFAM ID | [TIGR00338] phosphoserine phosphatase SerB [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.174471 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCGAAA TCGTCCTGAT CAACATCACC GGTGAGGACC GTCCCGGTCT CACTGCGGCT ATCACCGGCG TCCTGCTACA GGGCGGTGTG AGTATCCTCG ACATCGGCCT GGCGGTCATG CACGGCACCT TGTCGTTTGG CATCCTGGTC GACATCCCGG ACAACGAAGT GGCTACCGCG CTGTTGCAAA GCGTGCAGGC TAAAGCCCAC GAACTGAACC TGCAGGCCCG TTACACGCCG ATTTCCGAGG CGGACTACCA GCATTGGGCT GATGGGCATG GCGAAGCGCG CCACATCGTT ACCCTGCTCA GCCGTAAGAT TACTCCCGAG CAGCTGCAGC GGGTGAGTGC GGTGATCAGC CAGTACGGCC TGACCATCGA GCGTATCGAG CGCCTGTCGG CCCGGGTGGC ACTGGATGCC GAAACCGACA AGGGTAAGGC AGCCGTCGAG ATCTCCGTGC GCGGTGTACC GAGCGATGCC CAGGCCCTGC GTGCCGACTT CTTTGCCCTG GCTGAAGAGC TGAGCGTCGA CATCGCCTTC CAGAAGGACG ATCTGTTCCG CCGTAACCGC CGCCTGGCGG TGTTCGACAT GGACTCCACG CTGATCGAGG CCGAAGTCAT CGACGAACTG GCCAAGGCGG CGGGTGTGGG TGAGCAGGTG GCGGCGATCA CCGAGCGCGC CATGCGCGGT GAACTGGACT TCCGCGCCAG CTTCAAAGAG CGCATGGCGC TGCTCAAGGG CCTGGATGTG GGGGTACTGG ACGAGATCGG GGCATCGCTG CGCCTGACCG AGGGTGCCGA GAACCTGTTT GCCGAGCTCA AGCGCCTGGG ATACAAGACC GCGATTCTGT CCGGTGGCTT TACCTATTTC GCTCGTCAGG TGCAGGCGCG CCTGGGTATC GACTATGTGT TCGCCAACGA ACTTGAAGTG GTCGATGGCA AGGTGACGGG CGTGGCTGTT GAGCCGATTG TCGATGCCCA GCGCAAGGCC GATTTGTTGA AGAAGCTGGC CAGTGACGAA GGCTTGCAAC TGGAGCAGAC CATCGCCGTG GGCGATGGTG CCAATGACCT GCCGATGCTG TCGCTGGCCG GTTTGGGCGT GGCGTTTCGT GCCAAGCCGC TGGTGCGCCA GTCGGCCAAG CAGGCGATTT CCACCTTGGG GCTGGACGGG GTGCTGTATC TGCTGGGCCT GCGTGATCGT GACGCCCGCG GCTGA
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Protein sequence | MREIVLINIT GEDRPGLTAA ITGVLLQGGV SILDIGLAVM HGTLSFGILV DIPDNEVATA LLQSVQAKAH ELNLQARYTP ISEADYQHWA DGHGEARHIV TLLSRKITPE QLQRVSAVIS QYGLTIERIE RLSARVALDA ETDKGKAAVE ISVRGVPSDA QALRADFFAL AEELSVDIAF QKDDLFRRNR RLAVFDMDST LIEAEVIDEL AKAAGVGEQV AAITERAMRG ELDFRASFKE RMALLKGLDV GVLDEIGASL RLTEGAENLF AELKRLGYKT AILSGGFTYF ARQVQARLGI DYVFANELEV VDGKVTGVAV EPIVDAQRKA DLLKKLASDE GLQLEQTIAV GDGANDLPML SLAGLGVAFR AKPLVRQSAK QAISTLGLDG VLYLLGLRDR DARG
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