Gene Pput_4785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4785 
Symbol 
ID5195055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5359253 
End bp5360467 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content63% 
IMG OID640589270 
Productphosphoserine phosphatase SerB 
Protein accessionYP_001270089 
Protein GI148549987 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0560] Phosphoserine phosphatase 
TIGRFAM ID[TIGR00338] phosphoserine phosphatase SerB
[TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.174471 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCGAAA TCGTCCTGAT CAACATCACC GGTGAGGACC GTCCCGGTCT CACTGCGGCT 
ATCACCGGCG TCCTGCTACA GGGCGGTGTG AGTATCCTCG ACATCGGCCT GGCGGTCATG
CACGGCACCT TGTCGTTTGG CATCCTGGTC GACATCCCGG ACAACGAAGT GGCTACCGCG
CTGTTGCAAA GCGTGCAGGC TAAAGCCCAC GAACTGAACC TGCAGGCCCG TTACACGCCG
ATTTCCGAGG CGGACTACCA GCATTGGGCT GATGGGCATG GCGAAGCGCG CCACATCGTT
ACCCTGCTCA GCCGTAAGAT TACTCCCGAG CAGCTGCAGC GGGTGAGTGC GGTGATCAGC
CAGTACGGCC TGACCATCGA GCGTATCGAG CGCCTGTCGG CCCGGGTGGC ACTGGATGCC
GAAACCGACA AGGGTAAGGC AGCCGTCGAG ATCTCCGTGC GCGGTGTACC GAGCGATGCC
CAGGCCCTGC GTGCCGACTT CTTTGCCCTG GCTGAAGAGC TGAGCGTCGA CATCGCCTTC
CAGAAGGACG ATCTGTTCCG CCGTAACCGC CGCCTGGCGG TGTTCGACAT GGACTCCACG
CTGATCGAGG CCGAAGTCAT CGACGAACTG GCCAAGGCGG CGGGTGTGGG TGAGCAGGTG
GCGGCGATCA CCGAGCGCGC CATGCGCGGT GAACTGGACT TCCGCGCCAG CTTCAAAGAG
CGCATGGCGC TGCTCAAGGG CCTGGATGTG GGGGTACTGG ACGAGATCGG GGCATCGCTG
CGCCTGACCG AGGGTGCCGA GAACCTGTTT GCCGAGCTCA AGCGCCTGGG ATACAAGACC
GCGATTCTGT CCGGTGGCTT TACCTATTTC GCTCGTCAGG TGCAGGCGCG CCTGGGTATC
GACTATGTGT TCGCCAACGA ACTTGAAGTG GTCGATGGCA AGGTGACGGG CGTGGCTGTT
GAGCCGATTG TCGATGCCCA GCGCAAGGCC GATTTGTTGA AGAAGCTGGC CAGTGACGAA
GGCTTGCAAC TGGAGCAGAC CATCGCCGTG GGCGATGGTG CCAATGACCT GCCGATGCTG
TCGCTGGCCG GTTTGGGCGT GGCGTTTCGT GCCAAGCCGC TGGTGCGCCA GTCGGCCAAG
CAGGCGATTT CCACCTTGGG GCTGGACGGG GTGCTGTATC TGCTGGGCCT GCGTGATCGT
GACGCCCGCG GCTGA
 
Protein sequence
MREIVLINIT GEDRPGLTAA ITGVLLQGGV SILDIGLAVM HGTLSFGILV DIPDNEVATA 
LLQSVQAKAH ELNLQARYTP ISEADYQHWA DGHGEARHIV TLLSRKITPE QLQRVSAVIS
QYGLTIERIE RLSARVALDA ETDKGKAAVE ISVRGVPSDA QALRADFFAL AEELSVDIAF
QKDDLFRRNR RLAVFDMDST LIEAEVIDEL AKAAGVGEQV AAITERAMRG ELDFRASFKE
RMALLKGLDV GVLDEIGASL RLTEGAENLF AELKRLGYKT AILSGGFTYF ARQVQARLGI
DYVFANELEV VDGKVTGVAV EPIVDAQRKA DLLKKLASDE GLQLEQTIAV GDGANDLPML
SLAGLGVAFR AKPLVRQSAK QAISTLGLDG VLYLLGLRDR DARG