Gene Pput_4775 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4775 
Symbol 
ID5194106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5349020 
End bp5349943 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content68% 
IMG OID640589260 
Productcarbohydrate kinase, YjeF related protein 
Protein accessionYP_001270079 
Protein GI148549977 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0063] Predicted sugar kinase 
TIGRFAM ID[TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.686463 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAAGG CAATACGGGC TCAGGTGCGT ATAATTCTGC CAGACATTGG AGCCTTTGAC 
CCCATGCCGC AGACCAAACA CCCCAGTAAT GCCCCACAAT TGCTCAGCAG CGTGACGGTT
GCCCGCCTGC CGGCGCGGCA GGCGCATGCC CACAAAGGCG ACTTTGGCCA TGTACTGGTG
GTCGGTGGCG ACCTGGGTAC CGGAGGCGCT GTGTTGCTCA GTGCCGAAGC CGCCCTGCGT
TGCGGCGCCG GGCTGGTCAG CGTGGCAACC CGGCCCGAGC ACGTATCGGC CAGCCTGGCG
CGCCTGCCCG AGGTCATGTG CCTGGGTGTC CGTTCGGCCA ACCAACTGAT GGGTGTGCTG
GAGCGCGCCT CCGTCCTGGT GGTCGGGCCC GGCCTGGGGC AGGCGGCGTG GGGCTGTAGC
CTGTTGTCGG CGGTGGCCAA CGCCGAGCGG CCGCAAGTGT GGGATGCCGA TGCCTTGAAT
TTGCTGGCGC GAACCCCGCT GGCCCTGCCC AGTGGCAGCA TCCTTACTCC GCACCCGGGG
GAGGCGGCGC GGCTGCTGGG CATTGCCACT GAGGCCGTGC AGGCCGACCG CCCTGGTGCT
GCGCGCAAGC TGGCGCGCCG TTATAACAGC GTCTGTGTAC TCAAAGGTGC CGGCACCCTG
GTGGCAGCCC CGAGCGGGCA GCTGGCGTTG TGCGAGCGCG GGCACCCGGC GATGGCCGGC
GCCGGCCTGG GCGATGTGCT GACTGGCGTG CTGGCAGCCC TGTTGGCCCA AGGCCTGGAT
GCCTGGGGCG CAGCCTGTCT GGGGGTGTGG CTGCACGCCT GTGCCGGCGA GCGCCTTGGG
AAAAAAGGTA GAGGCCTGGC GGCCAGTGAT CTGGCGCCGG TCATTCGTGA GTTGTTGGAG
GAGCATTCTG CGTGTCTGGC TTAA
 
Protein sequence
MGKAIRAQVR IILPDIGAFD PMPQTKHPSN APQLLSSVTV ARLPARQAHA HKGDFGHVLV 
VGGDLGTGGA VLLSAEAALR CGAGLVSVAT RPEHVSASLA RLPEVMCLGV RSANQLMGVL
ERASVLVVGP GLGQAAWGCS LLSAVANAER PQVWDADALN LLARTPLALP SGSILTPHPG
EAARLLGIAT EAVQADRPGA ARKLARRYNS VCVLKGAGTL VAAPSGQLAL CERGHPAMAG
AGLGDVLTGV LAALLAQGLD AWGAACLGVW LHACAGERLG KKGRGLAASD LAPVIRELLE
EHSACLA