Gene Pput_4772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4772 
SymbolmutL 
ID5191424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5345219 
End bp5347120 
Gene Length1902 bp 
Protein Length633 aa 
Translation table11 
GC content65% 
IMG OID640589257 
ProductDNA mismatch repair protein 
Protein accessionYP_001270076 
Protein GI148549974 
COG category[L] Replication, recombination and repair 
COG ID[COG0323] DNA mismatch repair enzyme (predicted ATPase) 
TIGRFAM ID[TIGR00585] DNA mismatch repair protein MutL 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.209994 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAGTG GCGGTTCGCG AATTCAGCTG CTCAGCCCGC GGCTGGCCAA CCAGATTGCC 
GCCGGCGAGG TTGTCGAGCG GCCGGCGTCT GTAGCCAAGG AACTGCTGGA AAACAGCCTG
GACTCCGGTG CCCGGCGCAT CGATATCGAA GTCGAGCAGG GCGGCGTCAA ACTGCTGAAG
GTGCGGGACG ATGGCAGCGG TATTTCTGCC GACGACCTGC CGCTGGCCCT GGCCCGACAC
GCCACCAGCA AGATCCGCGA GCTGGAAGAC CTTGAAGGGG TATTGAGCCT GGGCTTCCGT
GGCGAGGCCT TGGCCTCGAT CAGTTCGGTG GCGCGCCTGA CCCTGACCTC GCGTACCGCC
AGTGCCAGTG AGGCCTGGCA AGTCGAAACC GAAGGCCGTG ACATGACGCC GCGCGTGCAG
CCGGCGGCGC ACCCGGTCGG TACCTCGGTG GAAGTGCGCG ATTTGTTCTT CAATACCCCG
GCCAGGCGCA AGTTCCTCAA AGCCGAGAAA ACCGAATTCG ATCACTTGCA GGAAGTGATC
CGGCGGCTGG CGCTGGCCCG TTTCGATGTC GGCTTCCACC TGCGCCACAA TGGCAAGAGC
ATCCTCAGTC TGCACGAGGC CCACGACGAA ACCGCCCGTG CACGGCGGGT GGGTGCCATC
TGCGGCCCGG GCTTCATGGA GCAGGCACTG CCGATCGACG TCGAGCGCAA CGGCCTGCGC
CTTTGGGGCT GGGTCGGCTT GCCGACGTTC TCGCGCAGCC AGGCAGACCT GCAGTACTTC
TTCGTCAATG GCCGGGCAGT GCGCGATAAA CTGGTCGCCC ATGCCGTGCG TCAGGCCTAC
CGGGACGTGC TGTTCAACGG CCGCCACCCC ACGTTCGTGC TGTTCCTGGA GCTGGAGCCC
AACGGCGTCG ATGTGAACGT GCACCCTACC AAGCATGAAG TGCGATTCCG TGAAGGGCGC
TCGGTGCATG ACTTCCTGTA TGGCACCTTG CACCGTGCCT TGGCCGATGT ACGTCCGGAA
GACCAGCTGG CCGCGCCTGC TGCCGTACCT GAGCTGGTTC GTCCCACGGG CCAGCAGGCC
GGTGAGTTCG GGCCCCAGGG TGAAATGCGC CTGGCCTCGC CGGTGCTTGA ACAGCCTCGA
GCCCCGCAAC AGTCGTTTTC CAATGGTGGC AGTGGCGCCG GTTACCAGTA TCAATACACC
CCACGTCCCT CACAGCCGCT GCCGGCCGCA GAGGCACAGG CGGTGTACCG CGAGTTCTAT
AAGCCGCTGG ACACCGGTGC TGCGCCTGCG ACGGCACTGC CCGAAAGCCA AGGCGACATT
CCCCCGCTAG GCTATGCCCT GGCGCAGCTC AAGGGTATCT ACATCCTGGC CGAGAACGCT
GTTGGCCTGG TGCTGGTGGA CATGCACGCT GCCCACGAGC GGATAATGTA CGAGCGCCTC
AAGGTGGCCA TGGCCAGCGA GGGCCTGAGT GGCCAGCCGC TGCTGGTGCC GGAGACCCTG
GCCCTTAGCC AGCGTGAAGC CGACTGTGCC GAAGAGCATG CACAGTGGTT TCAGCGGCTG
GGCTTCGAAT TGCAGCGCCT GGGCCCTGAG ACCCTGGCGA TTCGCCAGAT CCCGGCCTTG
CTCAAGCAGG CTGAAGCCAA CCGCCTGGTG CAGGACGTGC TTGCCGACCT TATGGAGTAC
GGCACCAGTG ATCGCATTCA GGCGCATCTC AACGAACTGC TCGGTACCAT GGCCTGCCAC
GGTGCCGTGC GCGCCAACCG GCGCCTGGCA ATTCCCGAGA TGAACGCCCT GCTGCGCGAC
ATGGAAAACA CCGAGCGCAG CGGCCAGTGC AACCATGGCC GTCCTACCTG GACTCAGATG
GGCCTGGACG ATCTGGACAA ACTTTTCCTG CGCGGTCGAT GA
 
Protein sequence
MMSGGSRIQL LSPRLANQIA AGEVVERPAS VAKELLENSL DSGARRIDIE VEQGGVKLLK 
VRDDGSGISA DDLPLALARH ATSKIRELED LEGVLSLGFR GEALASISSV ARLTLTSRTA
SASEAWQVET EGRDMTPRVQ PAAHPVGTSV EVRDLFFNTP ARRKFLKAEK TEFDHLQEVI
RRLALARFDV GFHLRHNGKS ILSLHEAHDE TARARRVGAI CGPGFMEQAL PIDVERNGLR
LWGWVGLPTF SRSQADLQYF FVNGRAVRDK LVAHAVRQAY RDVLFNGRHP TFVLFLELEP
NGVDVNVHPT KHEVRFREGR SVHDFLYGTL HRALADVRPE DQLAAPAAVP ELVRPTGQQA
GEFGPQGEMR LASPVLEQPR APQQSFSNGG SGAGYQYQYT PRPSQPLPAA EAQAVYREFY
KPLDTGAAPA TALPESQGDI PPLGYALAQL KGIYILAENA VGLVLVDMHA AHERIMYERL
KVAMASEGLS GQPLLVPETL ALSQREADCA EEHAQWFQRL GFELQRLGPE TLAIRQIPAL
LKQAEANRLV QDVLADLMEY GTSDRIQAHL NELLGTMACH GAVRANRRLA IPEMNALLRD
MENTERSGQC NHGRPTWTQM GLDDLDKLFL RGR