| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4767 |
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| Symbol | |
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| ID | 5195472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5340430 |
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| End bp | 5341299 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640589252 |
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| Product | HflC protein |
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| Protein accession | YP_001270071 |
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| Protein GI | 148549969 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAATA GATCGCTGAT CGCCCTGATC GCCGCCGTGG TCCTGGCCAT TGTGGCCTGG
AACAGCTTCT ACATCGTGTC CCAGACCGAG CGGGCGGTAC TGCTGCGTTT CGGTAAGGTG
GTCCAGGCGG ATGTTCAGCC AGGCCTGCAC GTGAAGATTC CGTACGTGAA CCAGGTGCGC
AGGTTCGACG CTAGGCTGAT GACACTCGAC GCGCCTACCC AGCGGTTCCT GACCCTGGAA
AAGAAAGCGG TGATGGTCGA CGCCTACGCC AAGTGGCGCG TCAAGGACGC TGAACGCTTC
TACACCGCCA CGTCCGGCAT GAAGCAGATC GCCGACGAGC GTCTGTCGCG TCGTCTGGAA
AGTGGCCTGC GCGACCAGTT CGGTAAACGT ACCCTGCACG AAGTGGTTTC CGGTGAACGT
GATGCACTGA TGGCTGACAT CACTGCATCG CTGAACCGCA TGGCGAGCAA GGAACTGGGC
ATCGAGGTGG TCGACGTGCG CGTCAAGGCC ATCGACCTGC CGAAGGAAGT CAACCGCAGC
GTGTTCGACC GCATGAGCAC CGAGCGTGAG CGTGAAGCCC GCGAGCACCG TGCCAAGGGT
AACGAGCTGG CTGAGGGTAT CCGTGCCGAT GCCGACCGTC AGCGCCGTGT GCTGCTGGCC
GAGGCTTATC GCGAAGCAGA AGAAACCCGT GGTGATGGCG ATGCCCAAGC GGCCGCTATC
TATGCCAAGG CTTACAGCCA GGACGCTGAT TTCTATGCGT TCCACCGTAG CCTGCAGGCA
TACCGCGAGA GCTTCTCGAG CAAGAGCGAC GTGATGGTCC TGGACCCGAA GAACGAATTC
TTCCGTTACC TGGACAAGAG CAGACCGTGA
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| Protein sequence | MSNRSLIALI AAVVLAIVAW NSFYIVSQTE RAVLLRFGKV VQADVQPGLH VKIPYVNQVR
RFDARLMTLD APTQRFLTLE KKAVMVDAYA KWRVKDAERF YTATSGMKQI ADERLSRRLE
SGLRDQFGKR TLHEVVSGER DALMADITAS LNRMASKELG IEVVDVRVKA IDLPKEVNRS
VFDRMSTERE REAREHRAKG NELAEGIRAD ADRQRRVLLA EAYREAEETR GDGDAQAAAI
YAKAYSQDAD FYAFHRSLQA YRESFSSKSD VMVLDPKNEF FRYLDKSRP
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