Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4766 |
Symbol | hisZ |
ID | 5195471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 5338941 |
End bp | 5340128 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640589251 |
Product | ATP phosphoribosyltransferase regulatory subunit |
Protein accession | YP_001270070 |
Protein GI | 148549968 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3705] ATP phosphoribosyltransferase involved in histidine biosynthesis |
TIGRFAM ID | [TIGR00443] ATP phosphoribosyltransferase, regulatory subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACGG TAGACCGCTG GCTGCTGCCA GATGGCATCG AGGAAGTACT GCCACCTGAG GCTGCGCGCA TCGAAATCGC GCGCCGCCAG GTGTTGGACC TGTTCCAGAG TTGGGGCTAC GAACTGGTCG TCACCCCGCA TATCGAGTAC CTGGAGTCGC TGCTTACCGG CGCCGGCCAG GACCTGGATC AGCGCACCTT CAAGGTAGTG GACCCGCAGT CCGGCCGCCT GATGGGCTTC CGCGCCGACT TCACCCCGCA GGTAGCGCGT ATCGATGCGC ACACACTGCG CCGTGAGGGC CCGAGCCGCC TGTGCTATGC CGGCAGCGTG CTGCACGCCC AGCCGCGTGC CCTGTCCACC TCGCGCAGCC CGATCCAGCT GGGTGCCGAG CTGTACGGCG ATGCCAGCCC TACCAGCGAC GTCGAAGTCA TCAGCCTGAT GCTCGCCACG CTACAACTGG CCGATGTGCC GGATGTGCAC ATGGACCTGG GCCACGTCGG TATTTACCGC GGCCTGGCCC GTGCCGCCGG CCTGTCTGGC GCGGTCGAAC AGCAGCTGTT CGACGCCATG CAACGCAAGG CTGTCGATGA AGTGCAGGCG CTGACCGCCG ACCTGCCGAA AGACCTGGGC AGCATGCTGC GCGCCCTGGT CGAGCTGTGC GGTGGTCGTG AAGTACTGGC TGAAGCCCGC GTGCGCCTCG GTCGCGCCCC GGCCAGCGTG CTGGCGGCGC TGGACGACCT GCTGGCGATC GCTGATCGCC TGGCGTCGCG CTACCCGGAC CTGCCGCTGT ACTTCGACCT CGGCGAGCTG CGTGGTTACC ACTATCACAC GGGCGTGGTG TTCGCCGTGT TCGTGCCAGG CGAAGGCCAA TCGATCGCCC AGGGCGGGCG CTACGACGAT ATCGGCGCCG ACTTTGGCCG GGCGCGCCCG GCCACTGGTT TCTCCACGGA TTTGAAGACC CTGGTCACAC TGGGGCGAGC GGAGGTCGTA TTGCCAACTG GCGGCATCTG GATGCCGGAC AGTGGCGATG CGGCCCTCTG GCAGCAAGTC TGCCAGTTGC GCAACGAGGG CCAGCGTGTG GTTCAGGCTC TGCCTGGCCA GCCGTTGAGT GCTGCTCTCG AGGCGGATTG TGATCGGCAA TTGATTCAGC AAGACGGGCG CTGGCAGGTT CTGCCGCTGG CCCAGTGA
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Protein sequence | MATVDRWLLP DGIEEVLPPE AARIEIARRQ VLDLFQSWGY ELVVTPHIEY LESLLTGAGQ DLDQRTFKVV DPQSGRLMGF RADFTPQVAR IDAHTLRREG PSRLCYAGSV LHAQPRALST SRSPIQLGAE LYGDASPTSD VEVISLMLAT LQLADVPDVH MDLGHVGIYR GLARAAGLSG AVEQQLFDAM QRKAVDEVQA LTADLPKDLG SMLRALVELC GGREVLAEAR VRLGRAPASV LAALDDLLAI ADRLASRYPD LPLYFDLGEL RGYHYHTGVV FAVFVPGEGQ SIAQGGRYDD IGADFGRARP ATGFSTDLKT LVTLGRAEVV LPTGGIWMPD SGDAALWQQV CQLRNEGQRV VQALPGQPLS AALEADCDRQ LIQQDGRWQV LPLAQ
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