| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4758 |
|---|
| Symbol | rpsF |
|---|
| ID | 5192835 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 5327190 |
|---|
| End bp | 5327615 |
|---|
| Gene Length | 426 bp |
|---|
| Protein Length | 141 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640589241 |
|---|
| Product | 30S ribosomal protein S6 |
|---|
| Protein accession | YP_001270062 |
|---|
| Protein GI | 148549960 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0360] Ribosomal protein S6 |
|---|
| TIGRFAM ID | [TIGR00166] ribosomal protein S6 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0734543 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCATT ACGAAATCAT CTTCCTGGTT CACCCGGACC AGAGCGAACA AGTCGGCGGC
ATGGTTGAGC GTTACACCAA GCTGATCGAA GAAGATGGTG GCAAAATCCA CCGCCTGGAA
GACTGGGGCC GTCGTCAACT GGCCTACGCA ATCAACAATG TTCACAAGGC TCACTACGTG
ATGCTGAACG TTGAGTGCAC CGGCAAGGCC CTGGCCGAGC TGGAAGACAA CTTCCGCTAC
AACGATGCCG TTATCCGTAA CCTGGTCATC CGTCGCGACG AAGCCGTTAC CGGCCAGTCC
GAGATGCTGA AGGCTGAAGA GAACCGCAGC GAGCGCCGTG AGCGTCGCGA GCGTCCTGAG
CATGCTGACT CCGCCGAAGG CGACGACAGC AATGACAGCG ACTCCAGCGA TAACGCTGAC
GAGTAA
|
|---|
| Protein sequence | MRHYEIIFLV HPDQSEQVGG MVERYTKLIE EDGGKIHRLE DWGRRQLAYA INNVHKAHYV
MLNVECTGKA LAELEDNFRY NDAVIRNLVI RRDEAVTGQS EMLKAEENRS ERRERRERPE
HADSAEGDDS NDSDSSDNAD E
|
|---|
| |