Gene Pput_4752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4752 
Symbol 
ID5192534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5321220 
End bp5322374 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content48% 
IMG OID640589235 
Producthypothetical protein 
Protein accessionYP_001270056 
Protein GI148549954 
COG category[S] Function unknown 
COG ID[COG1944] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0130582 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACCG AACGCGAGCT GAACATAGAA GAGGCCTACA ACCGCTTGAC AAGAATGCAT 
CATCACTTAG GGCTTCAATC GAAAACAGAA CTATCAAAAA AGAATAGCCT GGTCGCCACA
TGCCACTTAT ACGACAGCGC CTACAAAGAA GTTTCTTGCG GAGCAGGAAA AGGGGAGCAT
TGCGAACTAG GAGCCCTTGC CGAGAGCCTA GAGCATTACT TCGTCGACAA GAGCACTCCA
CCACTCATCG AAAGCGACCA AATTTTGCAA TCGATAGCCC CATTTGACGA TTGGCTTCTA
AAATCCATTC CCCCGGATTG CCGAATACCT TATTTCAGTC TTCAGGCATT GAACAGCTAC
GACGAAATAG CTATTCCCGC GATATTGATA GCACCTTCCT CCAGAAACAT TGATGAAATC
GAAAAAACTG CAGCGGGCTT TCTTTCCAAA TATTCGACCA ACTCTGGTAC AGCACTTGGC
TGCACGGAGA ACGAGGCTCT GCTCCACGCC ATCAATGAAG CTATCGAACG TCACGCACTT
TCTATGTACT ACCTATCACT TTGTGGCCTG ACTTCCCCAC CCAAACTTTA CCAACCTTCG
ATTTCTTTTC TGGAAGAAAC ATTTGCCCAT GATACCGAGC TTCTCCGTCG AGCCAAAAAA
CTAGAAATAT ACTTGACGCA CGACTTCTAC GAAGTTTCAT TTTGCATTGC TGTTTCTCGT
AGTAAAAAAG AAGGCTCACT CAGCAGCATT GGCTCCGGCA GCTCCATCAA CCCCTCCATT
GCAATGTACC GCGCCGTAAC GGAACAGATT CAGTGCGAGC AGCTTTCTGG GGCCACAGAA
AAACAAGAGG ATCTCTCTGC TGAAAAAATG CTTACTCATT CAACCCGCCT TTCAGCACTT
ATACACCCAT GCCCCACATA TGCTGTACCC GCTTTTCACC CTCCGCATAC CGACCTCAGC
GTGCGCGGGC AAGTCAAGCG AACACTGATC AACTTGGAAA AACATAATAA GGTCGCATTC
TATCGCACAC TTTATGAGCA CCCGAATCTC GCTACGGTTG TTCAGGTGTT CATACCCGGA
CTTGAACGCT TCCACCTGAT CAGATCAGGT ATTCCAGTCG CGCCACAGAG TGCACTCAAA
GGCATAAGGC AATGA
 
Protein sequence
MITERELNIE EAYNRLTRMH HHLGLQSKTE LSKKNSLVAT CHLYDSAYKE VSCGAGKGEH 
CELGALAESL EHYFVDKSTP PLIESDQILQ SIAPFDDWLL KSIPPDCRIP YFSLQALNSY
DEIAIPAILI APSSRNIDEI EKTAAGFLSK YSTNSGTALG CTENEALLHA INEAIERHAL
SMYYLSLCGL TSPPKLYQPS ISFLEETFAH DTELLRRAKK LEIYLTHDFY EVSFCIAVSR
SKKEGSLSSI GSGSSINPSI AMYRAVTEQI QCEQLSGATE KQEDLSAEKM LTHSTRLSAL
IHPCPTYAVP AFHPPHTDLS VRGQVKRTLI NLEKHNKVAF YRTLYEHPNL ATVVQVFIPG
LERFHLIRSG IPVAPQSALK GIRQ