Gene Pput_4747 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4747 
SymbolnadE 
ID5191696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5315346 
End bp5316173 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content64% 
IMG OID640589230 
ProductNAD synthetase 
Protein accessionYP_001270051 
Protein GI148549949 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0171] NAD synthase 
TIGRFAM ID[TIGR00552] NAD+ synthetase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000246424 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAAGCGG TTCAGCAAGA GATTGCCCAG GCGCTGAAGG TACAGCCGCC GTTCGCCAAC 
GCGGCAGCGC TCGAGGCCGA AGTCGCCCGA CGGGTGGCGT TCATCAAGGA CTGTCTGGCC
AATGCTCGAC TCAAGACCTT GGTGCTGGGC ATCAGCGGTG GCGTCGACTC ACTGACTGCC
GCCCTGCTCG CCCAGCGCGC CATCAACGAG CTGCGCGCCG AGACCGGCGA CAAGGCCTAC
ACGTTCATTG CCGTGCGCCT GCCGTACCAG GTACAGCATG ACGAGCATGA CGCCCAGGCA
TGCCTGGATG TGATCAAGGC AGATGAAGTT CACACGGTGG ATATCGCCCC GGCAGTGCGT
GCATTGGCAG CTGAAGTGGC GGCGCTGAAG AATGGCTCGC CGACGTTGGT GGACTTCGTG
GTTGGCAACG TCAAGGCACG TACCCGGATG GTCGCCCAGT ACACCATCGC TGGCGCCCGC
GCAGGTCTGG TGATCGGAAC CGACCACGCC GCCGAGGCGG TGATGGGCTT CTTTACCAAG
TTTGGTGATG GTGCCTGCGA CCTGGCGCCG TTGAGTGGGC TGGTGAAGAA TCAGGTGCGG
GCGATTGCGC GCAGCTTCGG TGCGCCGGAG TCACTGGTGG AAAAGGTGCC AACGGCCGAC
CTCGAAGACC TGGAGCCGGG CAAGCCGGAC GAGGCGTCAC ATGGCGTGAC CTACGCGCAG
ATCGATGCCT TCCTGCATGG GCAGCCGGTT GACCAGGCAG CGTTCGACAT CATCGTCGCC
ACCTACCGCA AGACCCAGCA CAAGCGCGAA CTGCCGTTCG CTCCTTGA
 
Protein sequence
MQAVQQEIAQ ALKVQPPFAN AAALEAEVAR RVAFIKDCLA NARLKTLVLG ISGGVDSLTA 
ALLAQRAINE LRAETGDKAY TFIAVRLPYQ VQHDEHDAQA CLDVIKADEV HTVDIAPAVR
ALAAEVAALK NGSPTLVDFV VGNVKARTRM VAQYTIAGAR AGLVIGTDHA AEAVMGFFTK
FGDGACDLAP LSGLVKNQVR AIARSFGAPE SLVEKVPTAD LEDLEPGKPD EASHGVTYAQ
IDAFLHGQPV DQAAFDIIVA TYRKTQHKRE LPFAP