Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4744 |
Symbol | |
ID | 5191208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 5311419 |
End bp | 5312333 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640589227 |
Product | inner-membrane translocator |
Protein accession | YP_001270048 |
Protein GI | 148549946 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.579328 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000000155208 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGATGGTA TTTTCCTGCA GCAACTGGTC AACGGCCTGA CCCTCGGGTC GGTCTATGGC CTGATCGCCA TCGGCTACAC AATGGTCTAT GGCATTATCG GCATGATCAA CTTCGCGCAC GGCGAGGTGT ACATGATCTC CGCTTACCTC GCGGCGATCA GCCTGGCATT GCTGGCTTAC TTCGGTGTCG AATCGTTCCC CCTGCTGATG CTGGGCACCT TGTTGTTCAC CATCGTCGTC ACCGGCGTTT ATGGTTTCAC CATCGAGCGC ATCGCCTACA AACCGCTGCG TAACTCCACC CGCCTGGCAC CGCTGATCAG TGCCATCGGC ATTTCGCTGA TCCTGCAGAA CTACGCACAG ATCAGCCAGG GCGCCCGCCA GCAAGGCGTG CCAACCCTGC TGGAAGGCGC CATGCGTGTC GAAGTCGGGT CCGGCTTCGT GCAACTGACT TATACCAAGA TCTTCATCCT GGTGGCGGCC TTTGTCGGCA TGGGCCTGCT GACCTACGTG ATCAAGTACA CCAAGCTCGG CCGCATGTGC CGTGCTACCC AGCAAGACCG CAAGATGGCC TCGATCCTGG GTATCAACAC CGACCGGGTA ATCTCCTACG TGTTCGTCAT CGGTGCAGTG ATGGCCGCCC TGGCCGGCGT GCTCATCACC ATGAACTACG GCACCTTCGA CTTCTACGCC GGCTTCATCA TCGGTATCAA GGCGTTCACT GCTGCTGTGC TCGGTGGCAT CGGCTCGCTG CCGGGTGCGA TGCTCGGCGG GATCATCCTG GGTATTTCCG AGTCGCTGTT CTCCGGCTTG ATCAACTCCG ACTACAAGGA CGTGTTCAGC TTCTCGCTGC TGGTGATGAT CCTTATCTTC CGCCCACAAG GCCTGCTGGG TCGCCCGCTC GTGGCTAAGG TGTGA
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Protein sequence | MDGIFLQQLV NGLTLGSVYG LIAIGYTMVY GIIGMINFAH GEVYMISAYL AAISLALLAY FGVESFPLLM LGTLLFTIVV TGVYGFTIER IAYKPLRNST RLAPLISAIG ISLILQNYAQ ISQGARQQGV PTLLEGAMRV EVGSGFVQLT YTKIFILVAA FVGMGLLTYV IKYTKLGRMC RATQQDRKMA SILGINTDRV ISYVFVIGAV MAALAGVLIT MNYGTFDFYA GFIIGIKAFT AAVLGGIGSL PGAMLGGIIL GISESLFSGL INSDYKDVFS FSLLVMILIF RPQGLLGRPL VAKV
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