Gene Pput_4744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4744 
Symbol 
ID5191208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5311419 
End bp5312333 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content59% 
IMG OID640589227 
Productinner-membrane translocator 
Protein accessionYP_001270048 
Protein GI148549946 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.579328 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000155208 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATGGTA TTTTCCTGCA GCAACTGGTC AACGGCCTGA CCCTCGGGTC GGTCTATGGC 
CTGATCGCCA TCGGCTACAC AATGGTCTAT GGCATTATCG GCATGATCAA CTTCGCGCAC
GGCGAGGTGT ACATGATCTC CGCTTACCTC GCGGCGATCA GCCTGGCATT GCTGGCTTAC
TTCGGTGTCG AATCGTTCCC CCTGCTGATG CTGGGCACCT TGTTGTTCAC CATCGTCGTC
ACCGGCGTTT ATGGTTTCAC CATCGAGCGC ATCGCCTACA AACCGCTGCG TAACTCCACC
CGCCTGGCAC CGCTGATCAG TGCCATCGGC ATTTCGCTGA TCCTGCAGAA CTACGCACAG
ATCAGCCAGG GCGCCCGCCA GCAAGGCGTG CCAACCCTGC TGGAAGGCGC CATGCGTGTC
GAAGTCGGGT CCGGCTTCGT GCAACTGACT TATACCAAGA TCTTCATCCT GGTGGCGGCC
TTTGTCGGCA TGGGCCTGCT GACCTACGTG ATCAAGTACA CCAAGCTCGG CCGCATGTGC
CGTGCTACCC AGCAAGACCG CAAGATGGCC TCGATCCTGG GTATCAACAC CGACCGGGTA
ATCTCCTACG TGTTCGTCAT CGGTGCAGTG ATGGCCGCCC TGGCCGGCGT GCTCATCACC
ATGAACTACG GCACCTTCGA CTTCTACGCC GGCTTCATCA TCGGTATCAA GGCGTTCACT
GCTGCTGTGC TCGGTGGCAT CGGCTCGCTG CCGGGTGCGA TGCTCGGCGG GATCATCCTG
GGTATTTCCG AGTCGCTGTT CTCCGGCTTG ATCAACTCCG ACTACAAGGA CGTGTTCAGC
TTCTCGCTGC TGGTGATGAT CCTTATCTTC CGCCCACAAG GCCTGCTGGG TCGCCCGCTC
GTGGCTAAGG TGTGA
 
Protein sequence
MDGIFLQQLV NGLTLGSVYG LIAIGYTMVY GIIGMINFAH GEVYMISAYL AAISLALLAY 
FGVESFPLLM LGTLLFTIVV TGVYGFTIER IAYKPLRNST RLAPLISAIG ISLILQNYAQ
ISQGARQQGV PTLLEGAMRV EVGSGFVQLT YTKIFILVAA FVGMGLLTYV IKYTKLGRMC
RATQQDRKMA SILGINTDRV ISYVFVIGAV MAALAGVLIT MNYGTFDFYA GFIIGIKAFT
AAVLGGIGSL PGAMLGGIIL GISESLFSGL INSDYKDVFS FSLLVMILIF RPQGLLGRPL
VAKV