| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4737 |
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| Symbol | |
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| ID | 5192622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5304959 |
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| End bp | 5305627 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640589220 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001270041 |
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| Protein GI | 148549939 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0397829 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000000987598 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCCCAGCC TGACCGTTAC AGAAGCCCGC ATCATGCTGC CGCGCGCCGA ACAGAAGCTA
CAGACCCGCC AGGCCCTGCT CGATGCCGCC TGCCTGCTCA TGGAGAGTGG CCGTGGTTTC
GGCAGTATCA GCCTGCGCGA AGTGGCGAAG ACAGCTGGCA TCGTGCCGAC CGGCTTCTAT
CGGCATTTCT CCGACATGGA CGCTCTGGGC CTGGCCCTTG TCGCCGAAAT CGACACCACC
TTCCGCCAGA CCATCCGCCT GGTGCGCCAG AACGAATTCG AACTGGGCGG CATCACCGAC
GCCTCGGTGC GCATCTTCCT CGACGTGGTC GCCGCCCACC GCGCGCAGTT CCTGTTCCTG
GCCCGCGAGC AGTACGGCGG TGCGCAGGCC GTGCGCCAGG CCATTGCCCG CCTGCGCCAG
GATATCAGCG ACGACCTTGC CACCGACCTT GCACGGATGA AGCGCTGGCA ACACCTGGAC
AGCGCCGCGC TTGCGGTGAT GGCCGACCTG GTGGTGAAGA CCGTTTTCGC CACCCTGCCC
GAGCTTATCG ACAACCCGGA AGCGGGTTAT CCACAGGCCC TGACGCCCCA GGAAAAGATC
ACCCAGCAGT TGCGCTTCAT CTTTGTCGGA GCGCGGCATT GGCAGGGGCT CGGCAACCCA
GGCTACTGA
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| Protein sequence | MPSLTVTEAR IMLPRAEQKL QTRQALLDAA CLLMESGRGF GSISLREVAK TAGIVPTGFY
RHFSDMDALG LALVAEIDTT FRQTIRLVRQ NEFELGGITD ASVRIFLDVV AAHRAQFLFL
AREQYGGAQA VRQAIARLRQ DISDDLATDL ARMKRWQHLD SAALAVMADL VVKTVFATLP
ELIDNPEAGY PQALTPQEKI TQQLRFIFVG ARHWQGLGNP GY
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