| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4735 |
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| Symbol | |
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| ID | 5191842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5301965 |
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| End bp | 5304031 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640589218 |
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| Product | AsmA family protein |
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| Protein accession | YP_001270039 |
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| Protein GI | 148549937 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00000197359 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGCGTC CCGCCAGAAT CCTCGTCTGG ACCCTCGCCA GCCTGCTTAC CGTGCTGGCG
ATCCTGGTGG TAGTGATTGC CACCTTCGAC TGGAACCGCG TCAAGCCACT GCTGAACGAG
AAGGTCTCCG AAGCCTTGCA TCGGCCCTTC GCGATCAACG GCAACCTCGC CGTGCACTGG
CGTACCGAGC CCGAAGAGGG CGGCTGGCGT GCCTGGGTGC CTTGGCCGCA CTTCATTGCC
GAAGACCTGA CACTGGGCAA CCCCGAGTGG CTCAAGGAGC CGAAGATGGT CGGCCTTGAG
CGCGTGGAGT TTCGCCTGGC GCCGCTGCCG CTGGTGTTCC AGCAGATCAG CATACCCCGC
ATCAACCTCA CCAAGCCCAC TGCCAGCCTC ACTCGCCTGG CCGATGGCCG CGCCAACTGG
GTCTTCGACT TCGGCCCCAA GGATGAAAAC GCTGAACCTT CTAAATGGCA GCTGGACATC
GGCGCCATCG GCTTTGACCA AGGCAACGTC AGCTTCGACG ACCAGACCCT CAAAACCAGC
ATGAAGGTGC AGATCGACCC GCTTGGCAAG CCAATCCCGT TCAGTGAGAT TGTCGGCAAG
GCCAGCGCCG AGAAGGCCGG CGGTGCGCAG GACTATGCCT TCGCGCTCAA GGCTCAGGGC
CGCTACAAAG GCCAGCCAGT GTCCGGCACC GGCAAGATCG GCGGCCTGCT GGCCCTGCAG
GACGCCAGCC AGCCGTTCCC GCTGCAGGCC GACGTGCGCA TCGCCGACAC CCATGTGGTG
CTCGCCGGCA CCCTCACCGA CCCGCGCAAC CTTGGTGCCC TCGACCTGCG CCTGCGTTTG
TCGGGTGCCA GCCTGGGCAA CCTCTACCCA TTGACCGGCG TCACCTTGCC TGACACCCCG
GCCTATTCCA CCGACGGCCG CCTAAGCGCC AACCTGCAGG CGGCGCAAGG GGCGTCGTTC
AATTACCAGG GCTTCAACGG CAAGATCGGC GACAGCGATA TCCATGGGGA CCTGGCCTTC
GTTGCCAGCC AGCCACGGCC CAGACTGTCC GGCAACCTGG TATCGAACCA GTTGCTGTTC
AAGGACCTGG CGCCGCTGAT CGGTGCCGAC TCCAATGCCG AACAGAAGGC CCGCGGCGGT
GCCAGCAAGC AGCCTGCAGG CAAGGTGCTG CCAGTGGAGG CGTTTCGCAC CGAGCGTTGG
CGGGCAATGG ACGCTGATGT CACCTTTGCT GGCAAGCGCA TCGTGCACAG CGCGCAACTG
CCGTTCACTG ACCTGTCGGC CCATGTGGTG CTCGAAGACG GCCTGTTACG CCTGGAGCCC
CTGCGCTTTG GCGTGGCCGG CGGCAGCCTG GCCTCCAACA TCCGCCTGGA CGGGCGCAGC
GTGCCCTTGC AGGGGCGCGC GAAGTTGACT GCGCGTGGCT TCAAGCTCAA GCAACTGTTC
CCTACCTTCG CGCCAATGCA GACCAGCTTT GGTGAGCTCA ATGGCGACGC CGACATCAGC
GGCCGTGGCA ACTCGGTAGC CGCCTTGCTG GGTACAGCCA ATGGCGACTT GCGCATGCTG
ATCAACGATG GCGCCATCAG CCGCAGCCTG ATGGAAATTG CCGGCTTGAA CGTGGGCAAC
TATGTGGTCG GCAAGCTGTT TGGTGATGAG GACGTGAAGA TCAACTGTGC GGCGGCCGAT
GTGGGCATCA AGGATGGCCT GGCGACTACG CGGCTGTTCA TCTTCGATAC CGAGAACGCG
ATCATCTACA TCGACGGCAC GGCGAATTTC GCTTCCGAGC AACTGGATTT GAACATCACC
CCGGAATCGA AAGGGCTGCG GTTGTTCTCG TTGCGTTCAC CCCTGTATGT GCGCGGACCG
TTTGCCAAAC CGAACGCCGG TGTGCAGGCA TTGCCGCTGG CGTTGCGTGG CGCAGGCATG
GTTGCGCTGG GTGTGGTGGC TGGGCCGGCG GCGGGGTTGC TGGCGCTGAT TGCGCCCAGC
AGCGGGGATG ACCCGAACCA GTGCACACCG TTGTTGCAGC AGATGAAGGC AGGCAAGGCG
CCGGCAGCGG TGAAAGCGCG GAAATAG
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| Protein sequence | MTRPARILVW TLASLLTVLA ILVVVIATFD WNRVKPLLNE KVSEALHRPF AINGNLAVHW
RTEPEEGGWR AWVPWPHFIA EDLTLGNPEW LKEPKMVGLE RVEFRLAPLP LVFQQISIPR
INLTKPTASL TRLADGRANW VFDFGPKDEN AEPSKWQLDI GAIGFDQGNV SFDDQTLKTS
MKVQIDPLGK PIPFSEIVGK ASAEKAGGAQ DYAFALKAQG RYKGQPVSGT GKIGGLLALQ
DASQPFPLQA DVRIADTHVV LAGTLTDPRN LGALDLRLRL SGASLGNLYP LTGVTLPDTP
AYSTDGRLSA NLQAAQGASF NYQGFNGKIG DSDIHGDLAF VASQPRPRLS GNLVSNQLLF
KDLAPLIGAD SNAEQKARGG ASKQPAGKVL PVEAFRTERW RAMDADVTFA GKRIVHSAQL
PFTDLSAHVV LEDGLLRLEP LRFGVAGGSL ASNIRLDGRS VPLQGRAKLT ARGFKLKQLF
PTFAPMQTSF GELNGDADIS GRGNSVAALL GTANGDLRML INDGAISRSL MEIAGLNVGN
YVVGKLFGDE DVKINCAAAD VGIKDGLATT RLFIFDTENA IIYIDGTANF ASEQLDLNIT
PESKGLRLFS LRSPLYVRGP FAKPNAGVQA LPLALRGAGM VALGVVAGPA AGLLALIAPS
SGDDPNQCTP LLQQMKAGKA PAAVKARK
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