Gene Pput_4724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4724 
Symbol 
ID5194091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5292752 
End bp5293267 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content64% 
IMG OID640589207 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001270028 
Protein GI148549926 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00375427 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCTACG AAATCCGCGA TGCCCGGCCC ACCGATGTGC CGGGCATACT GGACATCTAC 
AACGACGCGG TGCTCAACAC CACGGCGATC TGGAACGAAA CCCCGGTGGA CCTCGGCAAC
CGCCAGGCCT GGTTTGAAGC GCGGGCGCAG CAGGGCTACC CGATTTTGGT AGCTACAGAT
GAGACGGGCG TGCTGGGGTA TGCCTCGTTT GGCGACTGGC GGCCGTTCGA GGGCTTTCGC
CTGACTGTGG AGCACTCGGT GTATGTCCGT GGCGACCAAC GGGGCAAGGG ATTGGGGCCG
GTGTTGATGG CCGCGCTGAT CGAGCGTGCG AAGGGGTGCG GCAAGCATGT GATGGTGGCG
GCCATCGAGA GTGGCAATGC GGCGTCGGTT CGCCTGCATG AGCGGCTGGG CTTCGTGGTG
ACCGGCCAGA TGCCGCAGGT GGGGGTAAAG TTTGGCCGCT GGCTTGATCT GACCTTCATG
CAACTGGTGC TGAACCCGGG CGCCGAACCG ACCTGA
 
Protein sequence
MSYEIRDARP TDVPGILDIY NDAVLNTTAI WNETPVDLGN RQAWFEARAQ QGYPILVATD 
ETGVLGYASF GDWRPFEGFR LTVEHSVYVR GDQRGKGLGP VLMAALIERA KGCGKHVMVA
AIESGNAASV RLHERLGFVV TGQMPQVGVK FGRWLDLTFM QLVLNPGAEP T