Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4724 |
Symbol | |
ID | 5194091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 5292752 |
End bp | 5293267 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640589207 |
Product | GCN5-related N-acetyltransferase |
Protein accession | YP_001270028 |
Protein GI | 148549926 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1247] Sortase and related acyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00375427 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCTACG AAATCCGCGA TGCCCGGCCC ACCGATGTGC CGGGCATACT GGACATCTAC AACGACGCGG TGCTCAACAC CACGGCGATC TGGAACGAAA CCCCGGTGGA CCTCGGCAAC CGCCAGGCCT GGTTTGAAGC GCGGGCGCAG CAGGGCTACC CGATTTTGGT AGCTACAGAT GAGACGGGCG TGCTGGGGTA TGCCTCGTTT GGCGACTGGC GGCCGTTCGA GGGCTTTCGC CTGACTGTGG AGCACTCGGT GTATGTCCGT GGCGACCAAC GGGGCAAGGG ATTGGGGCCG GTGTTGATGG CCGCGCTGAT CGAGCGTGCG AAGGGGTGCG GCAAGCATGT GATGGTGGCG GCCATCGAGA GTGGCAATGC GGCGTCGGTT CGCCTGCATG AGCGGCTGGG CTTCGTGGTG ACCGGCCAGA TGCCGCAGGT GGGGGTAAAG TTTGGCCGCT GGCTTGATCT GACCTTCATG CAACTGGTGC TGAACCCGGG CGCCGAACCG ACCTGA
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Protein sequence | MSYEIRDARP TDVPGILDIY NDAVLNTTAI WNETPVDLGN RQAWFEARAQ QGYPILVATD ETGVLGYASF GDWRPFEGFR LTVEHSVYVR GDQRGKGLGP VLMAALIERA KGCGKHVMVA AIESGNAASV RLHERLGFVV TGQMPQVGVK FGRWLDLTFM QLVLNPGAEP T
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