| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4723 |
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| Symbol | |
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| ID | 5194070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5292022 |
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| End bp | 5292720 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640589206 |
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| Product | ABC transporter related |
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| Protein accession | YP_001270027 |
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| Protein GI | 148549925 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | [TIGR03410] urea ABC transporter, ATP-binding protein UrtE |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.254043 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00390984 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTCAAGA TCGACACCCT GCACCAGTAC TACGGCGGCA GCCACATCCT GCGCGGCCTG
TCCTTCGAAG CCAAGGTCGG CGAAGTGACC TGCCTGCTGG GCCGCAACGG CGTGGGCAAG
ACCACCTTGC TGCGCTGCCT GATGGGCCTG GTGCCCGCCC GCGACGGCAG CATCGAATGG
GAAGGCAAGC CGATCACCGC GTTCAAACCA CAGCAACGGG TGCAGGCCGG CATCGCCTAC
GTGCCCCAGG GCCGCGAAAT CTTCCCGCGC CTGACCGTCG AGGAAAACCT GCTGATGGGC
CTGTCGCGCT TCCCCGCCCG CGAAGCCCGC GAGGTACCAG CCTTCATCTA CGAGCTGTTC
CCTGTGCTGG AGCAGATGAA ACAACGCCGC GGTGGCGACC TGTCTGGCGG CCAGCAGCAA
CAGCTGGCCA TCGGCCGCGC CCTGGCCAGC CGCCCGCGCC TGCTGATTCT CGACGAGCCG
ACCGAAGGCA TCCAGCCGTC GGTGATCAAG GAGATCGGCG CGGTCATCCG CCGCTTGGCC
GAGCGTGGCG ACATGGCAAT TTTGCTGGTG GAGCAGTTCT ACGACTTTGC CGAAGCGCTG
GCTGACCAGT ACCTGGTCAT GGCCCGCGGC GAAATCATCC AGCGCGGCCG CGGCGAAAAC
ATGCAAGCCG AAGGTGTACG CGGGCTGGTA ACCATTTAA
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| Protein sequence | MLKIDTLHQY YGGSHILRGL SFEAKVGEVT CLLGRNGVGK TTLLRCLMGL VPARDGSIEW
EGKPITAFKP QQRVQAGIAY VPQGREIFPR LTVEENLLMG LSRFPAREAR EVPAFIYELF
PVLEQMKQRR GGDLSGGQQQ QLAIGRALAS RPRLLILDEP TEGIQPSVIK EIGAVIRRLA
ERGDMAILLV EQFYDFAEAL ADQYLVMARG EIIQRGRGEN MQAEGVRGLV TI
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