| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4717 |
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| Symbol | |
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| ID | 5193242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5283749 |
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| End bp | 5285116 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640589200 |
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| Product | peptidase |
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| Protein accession | YP_001270021 |
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| Protein GI | 148549919 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.292427 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0740605 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGGAA CACGCGTCTC TTTCTACAAC CTGGCCTGGC GTTGGCATTT CTATGCGGGG
CTGTTCGTGG CCCCGTTCAT GATCCTGTTG GCAATCACCG GGATCATCTA CTTGTTCAAG
CCCCAGCTCG ACCCGCTGCT GTACCGCGAC CTGATGGTGG TCGAGGCCGG CCAGCACCGG
CAGGGCGCAG ACACGATGCT GGCTGAAGTG CGCCAAGCCT ACCCAAAGGG CCACATCGCC
CAGTACTTGC CGCCACTGAA CGCCGCGCGC AGTGCGCAGT TCGTGGTGCA TAACGGCGGG
CGCGAACTGA ACGTGTTCGT CGACCCATAC AGCGGCAAGG TCCTCGGCGA ACAGGACGGC
AAGCAGAACC TGCAGGCCAT CGCCCGCGCC CTGCATGGCG AGCTGATGGT CGGCACGGTC
GGTGACCGGC TGGTGGAACT GGCGGCGGGC TGGGGCATCG TGCTGGTGGT ATCGGGCCTG
TACCTGTGGT GGCCGCGCGG GCGCAGTGGC GCTGGCGTGC TTTGGCCGCG GCTGACGGCA
CGCGGCCGGC TGCTCTGGCG TGACCTGCAC GCGGTAACCG GTTTCTGGGG TTCGGCCTTG
CTGTTGTTGA TGCTGATCAG CGGCATGACC TGGACCGGCT TGTGGGGCAA GCAGTACGCT
GATTTGTGGA ACCGCTTCCC GGCAGCCATG TGGAACGACG TGCCCAAGTC GGACCAGCAG
GCGCGTGAGC TGAACAGCGC ACACCGCCAG ACCGTACCCT GGGCCATGGA AAACACGCCG
ATGCCACAGT CCGGTGCACA CGCCGAGCAC GGCGGGCACC ACATGATGTC GGACCTGCCC
GCAGCGCCCC AGGTGAGCGT GCAACAGGTC GAAGACATTG CCACTTCGCG CCAGGTCGAG
CCGGGCTACA GCATTACCCT GCCCACGACT GCCGACGGGG TGTTCACCAT TGCCGTGTTC
GCCGACGACC CGCGCAACGA CGCCACCCTG CATGTCGACC AATACACCGG CAAGGTTCTG
GCCGATGTGC GCTGGCAGGA CTACAGCCCG GTTGCCCGCG CCACCGAGCT GGGCGTGATG
CTGCACGAAG GCAAGATGTT CGGGGCGCTG AACCAGATCA TCATCCTGCT GGTGTGCCTG
ATGATCCTGC TGGGTTCGAT GAGCGGGCTG GTGATGTGGT GGAAGCGCCG GCCGGACGGC
GGCCTGGGCG TACCGCCTTT GCGTCATGAC CTGCCACGCT GGAAGGCGGC GGTGGCAGTG
ATGCTGGTGC TGGGGGTGAT GTTCCCGCTG GTAGGGGTGT CGATGGTGGG GATGTGGGGG
GTGGATAGTT TGGTGGTGAG GCGCCGCAGG GTCTTGGCCA GCGCTTGA
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| Protein sequence | MRGTRVSFYN LAWRWHFYAG LFVAPFMILL AITGIIYLFK PQLDPLLYRD LMVVEAGQHR
QGADTMLAEV RQAYPKGHIA QYLPPLNAAR SAQFVVHNGG RELNVFVDPY SGKVLGEQDG
KQNLQAIARA LHGELMVGTV GDRLVELAAG WGIVLVVSGL YLWWPRGRSG AGVLWPRLTA
RGRLLWRDLH AVTGFWGSAL LLLMLISGMT WTGLWGKQYA DLWNRFPAAM WNDVPKSDQQ
ARELNSAHRQ TVPWAMENTP MPQSGAHAEH GGHHMMSDLP AAPQVSVQQV EDIATSRQVE
PGYSITLPTT ADGVFTIAVF ADDPRNDATL HVDQYTGKVL ADVRWQDYSP VARATELGVM
LHEGKMFGAL NQIIILLVCL MILLGSMSGL VMWWKRRPDG GLGVPPLRHD LPRWKAAVAV
MLVLGVMFPL VGVSMVGMWG VDSLVVRRRR VLASA
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