Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4712 |
Symbol | |
ID | 5192135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 5279057 |
End bp | 5279911 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640589195 |
Product | band 7 protein |
Protein accession | YP_001270016 |
Protein GI | 148549914 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.21194 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAGCC TCATCGTCGT CGGCGCCATT GCCCTGTTCG TCCTGATCAC CGTGTTCAAG GGGGTACGCA TCGTGCCCCA GGGCGAGGAA TGGATCGTCG AGCGCCTGGG CCGCTACCAC AGCACCCTCA AGCCGGGCCT GAACATTGTC ATCCCCTACA TGGACGTGGT CGCCTACCGC CTGCCGACCA AGGACATCAT CCTCGATGTG CAGCAGCAGG AAATCATCAC CAAGGACAAC GCGGTAATCG TCGCCAACGC CCTGTGTTTC GCCAAGGTAG TCGACCCGCA GAAAGCCTCG TATGGCGTGC AGGACTTCTC GTTCGCCGTC ACCAGCCTGA CCATGACCTC GCTGCGCGCC ATCGTCGGTG CAATGGACCT CGACGAGGCG CTGTCCAGCC GCGAGCAGAT CAAGGCCCGT CTGCGCGATG CAATGTCCGA GCAGACCGAA GACTGGGGCG TGACCGTGCG CTCGGTGGAA ATTCAAGACA TCAAACCTTC GGAAAACATG CAGTTGGCCA TGGAACGCCA GGCCGCAGCC GAGCGTGAGC GCAAGGCCGA CGTCACCCGC GCCGAAGGGG CCAAACAGGC GGCGATCCTC GAAGCAGAGG CGCGCCTGCA GGCGGCCAGG CTGGATGCCG AGGCGCAGAT CAGCCTGGCC GAGGCCTCGG CGCGCTCGAT TTCGCTGGTG AAGGAAGCGG TGGGCAACGA GACCGTACCG GCGATGTACC TATTGGGCGA ACGCTATGTG GGCGCGATGG AGAACCTGGC GGGCAGCAGC AATGCCAAGG TGGTGGTGTT GCCGGCTGAC CTGCAAGAGA CCGTGCGCGG GTTGATGGGC CGCAACAAGG TTTGA
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Protein sequence | MTSLIVVGAI ALFVLITVFK GVRIVPQGEE WIVERLGRYH STLKPGLNIV IPYMDVVAYR LPTKDIILDV QQQEIITKDN AVIVANALCF AKVVDPQKAS YGVQDFSFAV TSLTMTSLRA IVGAMDLDEA LSSREQIKAR LRDAMSEQTE DWGVTVRSVE IQDIKPSENM QLAMERQAAA ERERKADVTR AEGAKQAAIL EAEARLQAAR LDAEAQISLA EASARSISLV KEAVGNETVP AMYLLGERYV GAMENLAGSS NAKVVVLPAD LQETVRGLMG RNKV
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