Gene Pput_4712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4712 
Symbol 
ID5192135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5279057 
End bp5279911 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content63% 
IMG OID640589195 
Productband 7 protein 
Protein accessionYP_001270016 
Protein GI148549914 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.21194 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCC TCATCGTCGT CGGCGCCATT GCCCTGTTCG TCCTGATCAC CGTGTTCAAG 
GGGGTACGCA TCGTGCCCCA GGGCGAGGAA TGGATCGTCG AGCGCCTGGG CCGCTACCAC
AGCACCCTCA AGCCGGGCCT GAACATTGTC ATCCCCTACA TGGACGTGGT CGCCTACCGC
CTGCCGACCA AGGACATCAT CCTCGATGTG CAGCAGCAGG AAATCATCAC CAAGGACAAC
GCGGTAATCG TCGCCAACGC CCTGTGTTTC GCCAAGGTAG TCGACCCGCA GAAAGCCTCG
TATGGCGTGC AGGACTTCTC GTTCGCCGTC ACCAGCCTGA CCATGACCTC GCTGCGCGCC
ATCGTCGGTG CAATGGACCT CGACGAGGCG CTGTCCAGCC GCGAGCAGAT CAAGGCCCGT
CTGCGCGATG CAATGTCCGA GCAGACCGAA GACTGGGGCG TGACCGTGCG CTCGGTGGAA
ATTCAAGACA TCAAACCTTC GGAAAACATG CAGTTGGCCA TGGAACGCCA GGCCGCAGCC
GAGCGTGAGC GCAAGGCCGA CGTCACCCGC GCCGAAGGGG CCAAACAGGC GGCGATCCTC
GAAGCAGAGG CGCGCCTGCA GGCGGCCAGG CTGGATGCCG AGGCGCAGAT CAGCCTGGCC
GAGGCCTCGG CGCGCTCGAT TTCGCTGGTG AAGGAAGCGG TGGGCAACGA GACCGTACCG
GCGATGTACC TATTGGGCGA ACGCTATGTG GGCGCGATGG AGAACCTGGC GGGCAGCAGC
AATGCCAAGG TGGTGGTGTT GCCGGCTGAC CTGCAAGAGA CCGTGCGCGG GTTGATGGGC
CGCAACAAGG TTTGA
 
Protein sequence
MTSLIVVGAI ALFVLITVFK GVRIVPQGEE WIVERLGRYH STLKPGLNIV IPYMDVVAYR 
LPTKDIILDV QQQEIITKDN AVIVANALCF AKVVDPQKAS YGVQDFSFAV TSLTMTSLRA
IVGAMDLDEA LSSREQIKAR LRDAMSEQTE DWGVTVRSVE IQDIKPSENM QLAMERQAAA
ERERKADVTR AEGAKQAAIL EAEARLQAAR LDAEAQISLA EASARSISLV KEAVGNETVP
AMYLLGERYV GAMENLAGSS NAKVVVLPAD LQETVRGLMG RNKV