| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4709 |
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| Symbol | cbiD |
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| ID | 5193271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5276654 |
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| End bp | 5277748 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640589192 |
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| Product | cobalt-precorrin-6A synthase |
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| Protein accession | YP_001270013 |
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| Protein GI | 148549911 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1903] Cobalamin biosynthesis protein CbiD |
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| TIGRFAM ID | [TIGR00312] cobalamin biosynthesis protein CbiD |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.783318 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGAAG AAACCCGCGA ACAGCCCGCG CCTCTGCGCA GCGGCCTTAC CACCGGCAGC
TGCGCCACCG CCACCAGCCT GGCAGCGGCC AAGCTGCTGC TCACCGGGCA GCGTGATGAT
GCGGTGGACA TCACCCTGCC CAAAGGCAAG GTCGTGCAGA TGCGCCTGGA ATTCTGCCGC
CTGATCGGCG AGTGCGCCGA AGCCGGTACC CTCAAGGATG CGGGTGACGA CCCGGACGTG
ACCCACGGTG CCCTGCTCTA TAGCCAGGTG CGCCTGCTGG CGGAACCTGG CATTGGTTTT
GTCGCTGGCA GCGGCGTGGG CACGGTGACA CGCCCGGGGC TGGTGCTGGC GGTGGGTGAG
CCGGCCATCA ACCCGGTGCC TCGGCGCATG ATCAGTGAAC ACCTGCAACG CCTGGCCGAC
GCGTGCGGCT ACCTTGGCGG CTTCGAGGTC ACGGTCAATG TGCAAGGTGG TGAGCAACTG
GCCCTGAAAA CCATGAACCC GCGCCTGGGC ATCCTCGGCG GGCTGTCGAT CCTCGGCACC
AGCGGCATCG TCCGGCCGTT CTCTTGCGCG GCCTACATTG CCTCGATCCA CCAAGGCATC
GACGTGGCCC ACACCAACGG CTACACGCAC ATAGCCGCGT GCACCGGCAA TGCCAGCGAA
GACACCATGC GCCGCGTCTA CGGCCTGCCG GAAATCGCCC TGATCGAAAT GGGCGATTTC
GTCGGCGCGG TGCTCAAGCA CCTGCGCAAG GTACCGGTGC CGCGCCTGAC CCTGTGCGGC
GGCTTCGGCA AGATCAGCAA ACTGGCCGCC GGGCACATGG ACCTGCACAG TCGTCACTCC
AGCATCGACT TGCCGCAACT GGCAGGTTGG GCCGCAGACA TTGGCGCTGA CGAGGCGTTG
CAGGCTGCCA TCAGCGGTGC CAACACCAGC CAGCAAGCGC TCGCCCTGGC TCATGCGGCC
GGCATTGCCC TGGGTGACGC GGTGTGTGCC CACGCCCTAG CCTTCGCCCG TAGCGTCGTG
CCGGCGCAGG TGCACGTGGA GGTGTTCGCC ATCGACCGCC AAGGCGGCAT CGTCGGCCAG
GCGGGTGTGC AATGA
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| Protein sequence | MREETREQPA PLRSGLTTGS CATATSLAAA KLLLTGQRDD AVDITLPKGK VVQMRLEFCR
LIGECAEAGT LKDAGDDPDV THGALLYSQV RLLAEPGIGF VAGSGVGTVT RPGLVLAVGE
PAINPVPRRM ISEHLQRLAD ACGYLGGFEV TVNVQGGEQL ALKTMNPRLG ILGGLSILGT
SGIVRPFSCA AYIASIHQGI DVAHTNGYTH IAACTGNASE DTMRRVYGLP EIALIEMGDF
VGAVLKHLRK VPVPRLTLCG GFGKISKLAA GHMDLHSRHS SIDLPQLAGW AADIGADEAL
QAAISGANTS QQALALAHAA GIALGDAVCA HALAFARSVV PAQVHVEVFA IDRQGGIVGQ
AGVQ
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