Gene Pput_4684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4684 
Symbol 
ID5192327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5250961 
End bp5251437 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content60% 
IMG OID640589167 
Productiojap-like protein 
Protein accessionYP_001269988 
Protein GI148549886 
COG category[S] Function unknown 
COG ID[COG0799] Uncharacterized homolog of plant Iojap protein 
TIGRFAM ID[TIGR00090] iojap-like ribosome-associated protein 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCCCAA CTGACGGTGC CTCTGGCGCC TCATCCAACG AGTTGAACGA GTTTTATATG 
ACCAAGCAGA AAATTTACGG CGAAGAACTG GTCGCAGTGA CCAAGGCAGC GCTGGAAGAC
GTCAAGGCCC AGGACATCCA GGTCATCGAC GTGCGCGAGA AGCACAGCCT GACCGACTAC
ATGATCATTG CCACCGGTAC CTCCAACCGC CAGATCAACG CGATGGCCGA AAAGGTCCGT
GAAGCCGTCA AGGCCAAGGG CGCCCAGCCA CTGGGTGAAG AAGGCAAGGG CGACAGCGAC
TGGGTGCTGC TGGACCTGAA CGACGTCATC GTGCACATGA TGACCGCCGC TGCCCGCCAG
TTCTACGACC TTGAGCGCCT GTGGCAGGGT GCCGAGCAAA GCCGTGCCGC CGATGGCAAG
CACCACAGCC CGGACCATGC CCACGAGTAC TCCGACAAGC TCAAAGACCG CGAATAA
 
Protein sequence
MRPTDGASGA SSNELNEFYM TKQKIYGEEL VAVTKAALED VKAQDIQVID VREKHSLTDY 
MIIATGTSNR QINAMAEKVR EAVKAKGAQP LGEEGKGDSD WVLLDLNDVI VHMMTAAARQ
FYDLERLWQG AEQSRAADGK HHSPDHAHEY SDKLKDRE