| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4680 |
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| Symbol | |
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| ID | 5193868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5246407 |
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| End bp | 5247417 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640589163 |
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| Product | lytic murein transglycosylase B |
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| Protein accession | YP_001269984 |
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| Protein GI | 148549882 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02282] lytic murein transglycosylase B |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCAG TGCGTAACTG GGCTGCCCGT TGTGCGCCTT GGATCGGTGC GGTGGGCCTG
TTCGGCGCTG TACAGCTGGC CCATGCCGGC GAATACGACG GCTCGCCCCA GGTAGCCGCG
TTCGTTGGCG AAATGAGCCG CGACTATGGT TTTGCGCCTG AGCAACTGGT GGGTGTGTTC
CGTGAGGTAC AGCGCAAGCA GTCGATCCTC GACGCCATAT CGCGCCCGGC CGAGCGGGTC
AAACCGTGGA AGGACTATCG GCCGATGTTC ATCACCGATG CACGTATCGC TCGCGGTGTG
GATTTCTGGC GTCAGCACGA GGCTGTATTG GCACGTGCCG AGCAGGAGTA CGGCGTACCT
GCGCAGTACA TTGTCGCAAT CATCGGCGTG GAAACCTTTT TTGGCCGCAA TACCGGCAAC
TACCGGGTGA TCGACGCCCT GTCGACGCTG GGCTTCGACT ACCCGCCACG GGCCGAGTTC
TTCCGCAAGG AGCTGCGTGA GTTCCTGCTG CTGGCCCGGG ATGAGCAGCT CGACCCCTTG
ACGCTCAAGG GCTCGTACGC TGGCGCCATG GGGCTGCCGC AGTTCATGCC AAGCAGCTTC
CGCAACTACG CGGTGGACTT CGACGGGGAC GGCCACATCA ATATCTGGAA CAACCCTGAC
GATGCCATCG GCAGTGTGGC CAGCTACTTC AAGCGCCATG GCTGGGTGGC CGGCGAGGGT
GTTGTCAGCC GCGCCTGGGT GGAAGGCATG CGTGCTGACG AAGGCCTGAC CACCGGCATC
GAGCCGGTGA AAACGGTAGG GGAGTTGCGT ACGCTTGGCT GGTCGGTTCA TGATTCGCTG
CGCGATGATC TGCCGGTTAC CGCCTTCCGT CTCGAGGGCG AGAGCGGCCC CGAGTACTGG
ATGGGCCTGA AGAACTTCTA CGCGATCACT CGCTACAACC GCAGTGTGAT GTATGCCATG
GCGGTACATC AGCTTGCGGA ACAGCTGGTT CAAGTACGGG GCGTCAAGTA A
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| Protein sequence | MQAVRNWAAR CAPWIGAVGL FGAVQLAHAG EYDGSPQVAA FVGEMSRDYG FAPEQLVGVF
REVQRKQSIL DAISRPAERV KPWKDYRPMF ITDARIARGV DFWRQHEAVL ARAEQEYGVP
AQYIVAIIGV ETFFGRNTGN YRVIDALSTL GFDYPPRAEF FRKELREFLL LARDEQLDPL
TLKGSYAGAM GLPQFMPSSF RNYAVDFDGD GHINIWNNPD DAIGSVASYF KRHGWVAGEG
VVSRAWVEGM RADEGLTTGI EPVKTVGELR TLGWSVHDSL RDDLPVTAFR LEGESGPEYW
MGLKNFYAIT RYNRSVMYAM AVHQLAEQLV QVRGVK
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