| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4678 |
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| Symbol | |
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| ID | 5195563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5244025 |
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| End bp | 5245236 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640589161 |
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| Product | Serine-type D-Ala-D-Ala carboxypeptidase |
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| Protein accession | YP_001269982 |
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| Protein GI | 148549880 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.526181 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTTGC CCAGGGAACA TCTCAGACCA TTAGCGATTT TCGAGAGACG GATGAACATC
ACCAACCTTG CCAAACGACT TTGCCTGCCT GTACTGCTGC TGATCACGCC TGCCGCCTTC
GCGGCGGAGC AGATGACGCC TGCGCCACCC CAACTGGCAG CCAAGTCCTA CGTACTCATG
GACGCGTCCA GCGGCAACGT GCTGGTCGAG AACAACGGTG ACGAGCGCCT GCCGCCAGCC
AGCCTGACCA AGCTGATGAC CGCCTACATC GCCACCCTGG ACATCCGCCG CGGCCAGATC
GGTGAAAGCG ACCCGGTTAC TGTCAGCGAA AACGCATGGC GTACCGGCGG TTCGCGCATG
TTCATCAAGG TTGGCAGCCA GGTCACGGTC AGCGACCTGC TGCACGGCAT CATCATCCAG
TCCGGTAACG ACGCCTCGGT CGCCTTGGCC GAGCACATCG CCGGCAGCGA AGACGCCTTT
GCCGACATGA TGAACAAGAC GGCTGCCGAC CTGGGCATGA CCAACAGCCA CTTCATGAAC
CCGACCGGCC TGCCGAACCC CGAGCACTAC TCGTCGGCGC ACGACATGGC AACCCTGGCC
CGTGCGATCA TCAATGTCGA CCCGGCCCAC TACGCCATCT ACTCGCAGAA AGAGTTTTTC
TGGAACAACA TCAAGCAGCC TAACCGCAAC CTGCTGCTGT GGCGCGACAA GACCGTCGAT
GGCCTGAAAA CCGGTCACAC CGACGAAGCC GGCTACTGCA TGGTGGCTTC GGCCGTTCGT
GACGGCCAGC GCCTGATCGC CGTTGTGTTC GGTACCAACA GCGAACAATC GCGTGCTGCC
GAAACCCAGA AGCTGCTGAC CTACGGTTTC CGCTTCTTCG AAACCCAGAC CTTCTACCAG
AAGGGCACCG AGCTGACCCA GGCCCCGGTC TGGAAGGGCG CTACCAGCCA GATCAAGGCT
GGCCTGGCTG ACGACCTGAC CATGACTATG CCTAAAGGCC AATTGAAGCG CCTGCAGGCT
TCGATGACCA TGAACCCGCA GCTCACCGCA CCGATCGCCA AAGGTGACGT GATCGGCAAA
GTGGAAGTCA AACTGGACGA GAAAGTGGTT CACAGCGCCG ACCTGATTGC CCTTGATGGC
GTCGAGGAAG GTGGTTTCTT CCGCCGTATG TGGGATAGCA TCCGTCTATT CTTCTACGGG
TTGTTCAACT GA
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| Protein sequence | MILPREHLRP LAIFERRMNI TNLAKRLCLP VLLLITPAAF AAEQMTPAPP QLAAKSYVLM
DASSGNVLVE NNGDERLPPA SLTKLMTAYI ATLDIRRGQI GESDPVTVSE NAWRTGGSRM
FIKVGSQVTV SDLLHGIIIQ SGNDASVALA EHIAGSEDAF ADMMNKTAAD LGMTNSHFMN
PTGLPNPEHY SSAHDMATLA RAIINVDPAH YAIYSQKEFF WNNIKQPNRN LLLWRDKTVD
GLKTGHTDEA GYCMVASAVR DGQRLIAVVF GTNSEQSRAA ETQKLLTYGF RFFETQTFYQ
KGTELTQAPV WKGATSQIKA GLADDLTMTM PKGQLKRLQA SMTMNPQLTA PIAKGDVIGK
VEVKLDEKVV HSADLIALDG VEEGGFFRRM WDSIRLFFYG LFN
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