| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4676 |
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| Symbol | lipB |
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| ID | 5195136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5243029 |
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| End bp | 5243676 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640589159 |
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| Product | lipoate-protein ligase B |
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| Protein accession | YP_001269980 |
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| Protein GI | 148549878 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0321] Lipoate-protein ligase B |
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| TIGRFAM ID | [TIGR00214] lipoate-protein ligase B |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.946401 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCGCCT GCCTCGGTTT TCGCGAGCTT GGCCTGCAGC CCTATGAACC GGTGCTGGAG
GCCATGCGTC GTTTTACCGA GCAGCGCAGC CCGGACAGCC AGGATGAAAT CTGGCTGGTC
GAGCACCCTG CGGTCTTCAC CCAGGGGCAG GCCGGCAAGG CCGAGCACCT GCTGGTGCCG
GGCGACATCC CGGTGGTGCA GACCGACCGC GGCGGCCAGG TCACCTACCA TGGCCCCGGG
CAGCTGGTGG CCTACCTGCT GCTGGATGTG CGCCGGCTGG GCTTTGGCGT GCGTGAGCTG
GTCAGCCGTA TCGAGCTGGC CCTCATCGAC CTGCTCGCCA GCTATGCTGT TCAGGCGTCT
GCCAAGCCCG ATGCCCCGGG TGTCTATGTC GACGGAGCGA AAATCGCCTC CCTCGGCCTG
CGAATTCGCA ACGGCCGTTC GTTTCACGGC CTTGCCCTGA ACGTGGACAT GGACCTTGCG
CCATTCCGCC GAATCAACCC CTGCGGCTAT GCGGGGCTGG CGATGACCCA GCTGCGCGAT
CTGGCAGGTC CGATCGAACT CGACGAGGTC AGGACAAGGC TGCGCGGACA GCTGGTCAAG
CACCTCGACT ACGCTGAGCA GACGACCCTC ACGGGCGGAA TCGACTGA
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| Protein sequence | MSACLGFREL GLQPYEPVLE AMRRFTEQRS PDSQDEIWLV EHPAVFTQGQ AGKAEHLLVP
GDIPVVQTDR GGQVTYHGPG QLVAYLLLDV RRLGFGVREL VSRIELALID LLASYAVQAS
AKPDAPGVYV DGAKIASLGL RIRNGRSFHG LALNVDMDLA PFRRINPCGY AGLAMTQLRD
LAGPIELDEV RTRLRGQLVK HLDYAEQTTL TGGID
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