Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4674 |
Symbol | |
ID | 5195257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 5240973 |
End bp | 5241911 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640589157 |
Product | peptidase U61, LD-carboxypeptidase A |
Protein accession | YP_001269978 |
Protein GI | 148549876 |
COG category | [V] Defense mechanisms |
COG ID | [COG1619] Uncharacterized proteins, homologs of microcin C7 resistance protein MccF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATTGCG CCAAAACCTT CCAACCCACC CTGCCAGCCG CGCTGCCGGC CAACGCATGT TTTGCCATTG TCGCCCCGGC GGGCGCGGCG CGGCTTGATG CGCAGAAGGT TAGCCAGTGG TTCGTTGACC GCGGCTACCG GTCCCGTATC TACCCGGGTG CCCTGCAGGC GCAGGGCTAC CTGGCGGGGC CGGACCAGCA GCGCCTGCAG GACTTGCATG CAGCGTTTGC CGATCCGGCC ATGGACGCCA TCCTGTGCAT GCGTGGGGGC TACGGCAGCA TGCGCCTGCT TGACCAGCTC GACTTTGAAC TGATCCGGCG CAACCCCAAG CCGCTGATCG GCTACAGCGA CATCACCGCG CTGCATACGG CGATCTACCG GCATGCCGGG CTGCTGACCT TTCATGGGGG GATGCTCAAT GCCGACCTGT TGGGGGCCAA GTTGCCACCG ACCGAGTCGT CGTTGCTGGC GCAACTGGGT GGGCATGTGA GGGCAGGCGA GCAGGTCGCG CACCCGGCGG GCTTCGCATT GGACTGTGTG CTGCCGGGGG TGGCCAGCGG ACCGCTGCTG GGTGGCAACC TGTCGATGCT GGGGGCGACC ATGGGGACCC TTGCCGAGCT GGATACCCAG GGCTGCATCC TGTTCATCGA GGACGTCAAC GAGCCGTTGT ACAGGGTGGA TCGGCTGCTG ACCCAGTTAC GCCTGGCAGG CAAGCTGGAG GGGGTCAAAG GCGTGTTGGT GGGCGACTTT GCCGGGATTA CCACAGCGGC GCTGACGCCG TTGCTGGAGG ATACGTTTGC ACCGCTGGGT GTGCCGGTGC TGGCGGGTTG GCGCAGCGGG CACTGTGACC CGAATGTCTG CTTGCCCCTG GGGGCTCGGG TGAGGCTGGA CAGTGTTCAG CAAACACTGG TGCTGGAGCA GGATCTGTTC AGGGCGTGA
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Protein sequence | MYCAKTFQPT LPAALPANAC FAIVAPAGAA RLDAQKVSQW FVDRGYRSRI YPGALQAQGY LAGPDQQRLQ DLHAAFADPA MDAILCMRGG YGSMRLLDQL DFELIRRNPK PLIGYSDITA LHTAIYRHAG LLTFHGGMLN ADLLGAKLPP TESSLLAQLG GHVRAGEQVA HPAGFALDCV LPGVASGPLL GGNLSMLGAT MGTLAELDTQ GCILFIEDVN EPLYRVDRLL TQLRLAGKLE GVKGVLVGDF AGITTAALTP LLEDTFAPLG VPVLAGWRSG HCDPNVCLPL GARVRLDSVQ QTLVLEQDLF RA
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