Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4657 |
Symbol | |
ID | 5195231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 5223049 |
End bp | 5225037 |
Gene Length | 1989 bp |
Protein Length | 662 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640589140 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001269961 |
Protein GI | 148549859 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.475165 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTATT TGCTGATTGT GCTTATGGGT TTGCTGCCCG TGCTGGCCGG AGCGGTCGAT TTCGACGACG CTACCCGGTA TCTCCCACTG GGCAAGGCCA TGCAGGTTTA TGAAGACCCC GATGGCAATG CCAGCATCGC TCAGGTCAGT GCCCCCGGGT TTGCCAAATA CTTTCAGCCC CACCGTGAGG ATGTGCTGAA CGCCGGTTAC TCCACCTCGG TGTTCTGGCT CAAGGTCGAG CTGCGCCCCG TTGCCGTGCC CAGCGCAGCC CCGCGGCAAT GGCTGCTGGA GCTGGCCTAC CCGCCGCTGG ATCACCTCGA ACTGTATTTG CCTGACAGCA GCGGCTTGTA CCGCCTGGCG CAGCGCACGG GCGATGCCTT GCCCTACGAC AGCCGGCAGA TCCGGCAGAA CAACTACTTG TTCGAACTGC AACTGCCACC TGGCAAGGTG ACCACCGCGT ACCTGCGGCT GCAAAGCCAG GGTTCGGTGC AAGCGCCGCT GGCACTATGG TCCCCTGACG CCTATCTGGA AGAGCAGCCC ACGCGCCTGT ATGTGCTGGG GATGATCTAC GGCGTGTTGC TGGTGATGCT GGTGTACAAC CTGTTCATCT ACCTCAGCGT GCGTGACGTC AGCTACCTCT ATTACATCCT TTACATCGCT TCGTTCGGCC TTTACCAGGT CTCGGTGAAT GGCGCCGGTG TAGCCTATTT CTGGCCAGAC AGCCCTTGGT GGGCGAATGC CTCCACGCCT TTGTTCATCG GTGCAGCCGG CCTGTTCGGT TGCCAGTTCG CCCGGCACTT CCTGCAATTG GGCAGCATCA GCCGTGGTTT CGACCGCCTG TTGCAACTGC TGATGCTGGG TGGCGCGCTG GTCATGGTAC TGGCGGTGAG CATGCCCTAC GGCATTGCGC TGCGCATGGC CACGCTGCTG GCGCTGCTGT TCACCATAAG CGTCTTCAGC GCCGGCCTGT ATGCCTGGTG GCGCGGCTTG CGAGTGGCGC GCTGGTTCAT CATCGCCTGG ACGGCGTTCC TGCTTGGTGG TCTGGTCAAC ACCTTGATGG TGCTGGGCTA CCTGCCGAAC GTGTTCATCA CCATGTATGC CAGCCAGCTC GGTTCGGCCT TGGAAGTGGC TTTGCTGTCG CTGGCGCTGG CCGACCGCAT CAACAGCCTG CGCGAGCAGC AGGCACAGAC CTTGCGCGAC ACTGGGCGTA CGCTGGAGCA ACTGAACCTG CAACTGGCCA GGAGCAATCG TCTGAAGGAC GAGTTCCTGG CCAGCGTGAC GCATGAACTG CGCACCCCGA TGAATGGGGT GATTGGCTCG CTCGAGCTGA TGCACACCCT ACCGATGGGG GCTGAAATGG CTCAGTACCA TCACACGGCA GTAGGGTCTG CCCAAGGCAT GATGGATATG GTCGATGCCA TTCTTACCCT GTCCGAATTG CAGGCCGGCC GCCTGCGGGC GCAGCCGGCA CCGTTCAGCC TGCGCGCCCT GTTGCAAGGC TTGCGCGCCG GTTATGCCGG GCAGGCGCTG GGCAAAGGCT TGTACCTGAG CCTGGATATT CCGGCCGACC TGCCGGACGG GTTGCTCGGT GACGGGCAGA AACTGGCGCA CTGCCTGGGT TGCCTGGTGG ACAACGGTTT GAAGTTCACC CATCAGGGCG GTGTGATGAT CCAGGTGCGC GGCCGCCGGG TGGGGCCGGA TGATCTGGCG TTGACCTTTA CCGTCAGCGA CAGCGGTATC GGTTTCGATG ATCTGGAGCA GTCGACCCTG TACCAGCGGT TCTTCCAGGT CGACGGTTCG ATGACCCGGC GGTATGGCGG TTTGGGGATT GGGTTGTCGA TTTGCCGGCA GATGGGAGAG TTGCTGGGGG CCAGATTGGC GCATGAATCG ACGCGCGGGT TGGGCAGCCG CTTCGAGTTG AGTTTGAATG TAGCGATTTC GCAGGTGCAG ATGAGCCCGA ACCTGCTGCA GGTGAGGCGC TCGCTGTAG
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Protein sequence | MRYLLIVLMG LLPVLAGAVD FDDATRYLPL GKAMQVYEDP DGNASIAQVS APGFAKYFQP HREDVLNAGY STSVFWLKVE LRPVAVPSAA PRQWLLELAY PPLDHLELYL PDSSGLYRLA QRTGDALPYD SRQIRQNNYL FELQLPPGKV TTAYLRLQSQ GSVQAPLALW SPDAYLEEQP TRLYVLGMIY GVLLVMLVYN LFIYLSVRDV SYLYYILYIA SFGLYQVSVN GAGVAYFWPD SPWWANASTP LFIGAAGLFG CQFARHFLQL GSISRGFDRL LQLLMLGGAL VMVLAVSMPY GIALRMATLL ALLFTISVFS AGLYAWWRGL RVARWFIIAW TAFLLGGLVN TLMVLGYLPN VFITMYASQL GSALEVALLS LALADRINSL REQQAQTLRD TGRTLEQLNL QLARSNRLKD EFLASVTHEL RTPMNGVIGS LELMHTLPMG AEMAQYHHTA VGSAQGMMDM VDAILTLSEL QAGRLRAQPA PFSLRALLQG LRAGYAGQAL GKGLYLSLDI PADLPDGLLG DGQKLAHCLG CLVDNGLKFT HQGGVMIQVR GRRVGPDDLA LTFTVSDSGI GFDDLEQSTL YQRFFQVDGS MTRRYGGLGI GLSICRQMGE LLGARLAHES TRGLGSRFEL SLNVAISQVQ MSPNLLQVRR SL
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