Gene Pput_4657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4657 
Symbol 
ID5195231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5223049 
End bp5225037 
Gene Length1989 bp 
Protein Length662 aa 
Translation table11 
GC content62% 
IMG OID640589140 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001269961 
Protein GI148549859 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.475165 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTATT TGCTGATTGT GCTTATGGGT TTGCTGCCCG TGCTGGCCGG AGCGGTCGAT 
TTCGACGACG CTACCCGGTA TCTCCCACTG GGCAAGGCCA TGCAGGTTTA TGAAGACCCC
GATGGCAATG CCAGCATCGC TCAGGTCAGT GCCCCCGGGT TTGCCAAATA CTTTCAGCCC
CACCGTGAGG ATGTGCTGAA CGCCGGTTAC TCCACCTCGG TGTTCTGGCT CAAGGTCGAG
CTGCGCCCCG TTGCCGTGCC CAGCGCAGCC CCGCGGCAAT GGCTGCTGGA GCTGGCCTAC
CCGCCGCTGG ATCACCTCGA ACTGTATTTG CCTGACAGCA GCGGCTTGTA CCGCCTGGCG
CAGCGCACGG GCGATGCCTT GCCCTACGAC AGCCGGCAGA TCCGGCAGAA CAACTACTTG
TTCGAACTGC AACTGCCACC TGGCAAGGTG ACCACCGCGT ACCTGCGGCT GCAAAGCCAG
GGTTCGGTGC AAGCGCCGCT GGCACTATGG TCCCCTGACG CCTATCTGGA AGAGCAGCCC
ACGCGCCTGT ATGTGCTGGG GATGATCTAC GGCGTGTTGC TGGTGATGCT GGTGTACAAC
CTGTTCATCT ACCTCAGCGT GCGTGACGTC AGCTACCTCT ATTACATCCT TTACATCGCT
TCGTTCGGCC TTTACCAGGT CTCGGTGAAT GGCGCCGGTG TAGCCTATTT CTGGCCAGAC
AGCCCTTGGT GGGCGAATGC CTCCACGCCT TTGTTCATCG GTGCAGCCGG CCTGTTCGGT
TGCCAGTTCG CCCGGCACTT CCTGCAATTG GGCAGCATCA GCCGTGGTTT CGACCGCCTG
TTGCAACTGC TGATGCTGGG TGGCGCGCTG GTCATGGTAC TGGCGGTGAG CATGCCCTAC
GGCATTGCGC TGCGCATGGC CACGCTGCTG GCGCTGCTGT TCACCATAAG CGTCTTCAGC
GCCGGCCTGT ATGCCTGGTG GCGCGGCTTG CGAGTGGCGC GCTGGTTCAT CATCGCCTGG
ACGGCGTTCC TGCTTGGTGG TCTGGTCAAC ACCTTGATGG TGCTGGGCTA CCTGCCGAAC
GTGTTCATCA CCATGTATGC CAGCCAGCTC GGTTCGGCCT TGGAAGTGGC TTTGCTGTCG
CTGGCGCTGG CCGACCGCAT CAACAGCCTG CGCGAGCAGC AGGCACAGAC CTTGCGCGAC
ACTGGGCGTA CGCTGGAGCA ACTGAACCTG CAACTGGCCA GGAGCAATCG TCTGAAGGAC
GAGTTCCTGG CCAGCGTGAC GCATGAACTG CGCACCCCGA TGAATGGGGT GATTGGCTCG
CTCGAGCTGA TGCACACCCT ACCGATGGGG GCTGAAATGG CTCAGTACCA TCACACGGCA
GTAGGGTCTG CCCAAGGCAT GATGGATATG GTCGATGCCA TTCTTACCCT GTCCGAATTG
CAGGCCGGCC GCCTGCGGGC GCAGCCGGCA CCGTTCAGCC TGCGCGCCCT GTTGCAAGGC
TTGCGCGCCG GTTATGCCGG GCAGGCGCTG GGCAAAGGCT TGTACCTGAG CCTGGATATT
CCGGCCGACC TGCCGGACGG GTTGCTCGGT GACGGGCAGA AACTGGCGCA CTGCCTGGGT
TGCCTGGTGG ACAACGGTTT GAAGTTCACC CATCAGGGCG GTGTGATGAT CCAGGTGCGC
GGCCGCCGGG TGGGGCCGGA TGATCTGGCG TTGACCTTTA CCGTCAGCGA CAGCGGTATC
GGTTTCGATG ATCTGGAGCA GTCGACCCTG TACCAGCGGT TCTTCCAGGT CGACGGTTCG
ATGACCCGGC GGTATGGCGG TTTGGGGATT GGGTTGTCGA TTTGCCGGCA GATGGGAGAG
TTGCTGGGGG CCAGATTGGC GCATGAATCG ACGCGCGGGT TGGGCAGCCG CTTCGAGTTG
AGTTTGAATG TAGCGATTTC GCAGGTGCAG ATGAGCCCGA ACCTGCTGCA GGTGAGGCGC
TCGCTGTAG
 
Protein sequence
MRYLLIVLMG LLPVLAGAVD FDDATRYLPL GKAMQVYEDP DGNASIAQVS APGFAKYFQP 
HREDVLNAGY STSVFWLKVE LRPVAVPSAA PRQWLLELAY PPLDHLELYL PDSSGLYRLA
QRTGDALPYD SRQIRQNNYL FELQLPPGKV TTAYLRLQSQ GSVQAPLALW SPDAYLEEQP
TRLYVLGMIY GVLLVMLVYN LFIYLSVRDV SYLYYILYIA SFGLYQVSVN GAGVAYFWPD
SPWWANASTP LFIGAAGLFG CQFARHFLQL GSISRGFDRL LQLLMLGGAL VMVLAVSMPY
GIALRMATLL ALLFTISVFS AGLYAWWRGL RVARWFIIAW TAFLLGGLVN TLMVLGYLPN
VFITMYASQL GSALEVALLS LALADRINSL REQQAQTLRD TGRTLEQLNL QLARSNRLKD
EFLASVTHEL RTPMNGVIGS LELMHTLPMG AEMAQYHHTA VGSAQGMMDM VDAILTLSEL
QAGRLRAQPA PFSLRALLQG LRAGYAGQAL GKGLYLSLDI PADLPDGLLG DGQKLAHCLG
CLVDNGLKFT HQGGVMIQVR GRRVGPDDLA LTFTVSDSGI GFDDLEQSTL YQRFFQVDGS
MTRRYGGLGI GLSICRQMGE LLGARLAHES TRGLGSRFEL SLNVAISQVQ MSPNLLQVRR
SL