Gene Pput_4650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4650 
Symbol 
ID5195503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5215748 
End bp5216620 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content66% 
IMG OID640589133 
Productcation diffusion facilitator family transporter 
Protein accessionYP_001269954 
Protein GI148549852 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0053] Predicted Co/Zn/Cd cation transporters 
TIGRFAM ID[TIGR01297] cation diffusion facilitator family transporter 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.188299 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACTA CTCCGGCTGA ACACCAGCGC CTGCTCCGCC TGGCCACGCG CGCGTCACTG 
GCGGTGGCCA GCATCCTGGT GCTGAGCAAG GCGCTGGCCT GGTGGCTGAG CGGTTCGGTG
AGCCTGCTGG CCGGGCTGAC TGACTCGGCA CTGGACGCCG TGGCCTCGTT CCTCAACCTG
CTGGCGGTGC ACTACGCCCT GCGCCCGGCA GACGACGATC ACCGGTTCGG CCATGGCAAG
GCCGAGGCCT TGGCCGGTAT GGCGCAGGCG CTGTTCATCG GTGGCAGTGC GGTGCTGATC
GGGGTGCAGG CGGTCGAGCG CCTGTCCACC CCGCAACCGC TGGGTGATAC CTCAATCGGA
ATCGCGGTGA TGCTGCTGTC GCTGGTGCTG ACGGTCGCCC TGCTGGCGCT GCAGTACAAG
GTAATCCGGC TCACCGGCTC TACTGCGGTA CGGGCAGATT CACTGCACTA CCGTTCTGAC
TTGTTGCTCA ACGGCAGCAT TCTGCTGGCC CTGTTGCTGG CGCGCTTTGG CTGGCCGCAG
CTGGATGCGC TGTTCGGCCT GGGCATCGCC TTTTACATCC TCTGGAGCGC GCTGCAAATT
GCCCGCGAAA GTACGGCGAT TCTGATGGAC AAAGCGTTAC CCGGCGACGT TGGCGAGGAC
ATGGCTGCGC TGGTGCTGGC CGTTGCAGGC GTGAAAGGCG TGCATGACCT GCGCACGCGC
GTGTCGGGCA ACCAGTGGTT TGTGCAACTG CACCTGGAGC TGCCGGGGCA ACTGCCGCTG
CATGAGGCGC ACAGCTTGTG CGTGGAGGGC TCGCGGGTGA TCCGCCAGCG TTACCCACAG
GCGGACGTGA TGGTGCACGC CGACCCGGTA TGA
 
Protein sequence
MITTPAEHQR LLRLATRASL AVASILVLSK ALAWWLSGSV SLLAGLTDSA LDAVASFLNL 
LAVHYALRPA DDDHRFGHGK AEALAGMAQA LFIGGSAVLI GVQAVERLST PQPLGDTSIG
IAVMLLSLVL TVALLALQYK VIRLTGSTAV RADSLHYRSD LLLNGSILLA LLLARFGWPQ
LDALFGLGIA FYILWSALQI ARESTAILMD KALPGDVGED MAALVLAVAG VKGVHDLRTR
VSGNQWFVQL HLELPGQLPL HEAHSLCVEG SRVIRQRYPQ ADVMVHADPV