Gene Pput_4646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4646 
Symbol 
ID5194947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5211330 
End bp5211986 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content63% 
IMG OID640589129 
Producthypothetical protein 
Protein accessionYP_001269950 
Protein GI148549848 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.394398 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0700701 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCGC TGAGCGTTTT GCGCGACTCC TTGTACTTCT TCCGCCGTCA CCTGCCAAAC 
ATCCTGCAGC TGTGCCTGCC GCTGGTGGTG GTGGAAGCCC TGGTCACCCA ATTGCTGTAC
CGGCAGCTGG GCGACCAGGC ATCACCGGCC TACGGCATGC TGGTCAGCCT GTTGTTCTAC
CCGCTGTACA GCGCAGCCCT GATCCTGTAC CTGGACACGC GCAGCAACGG CCAGGAAATC
GCCAAGCGCG ACCTGTTCGC CCGCGCCCTG CAGCTGTGGC CGCAACTGGC CCTGCTGATC
CTGATCAGCT CGCTACTGAT CATGGCCGGC CTTGCGCTGT TCATCTTCCC GGGGGTGTGG
ATCATGATCA ACCTGGTGTT CGCCGAGTAC CTGCTGGTGC TGCGCGGCCG GCCGGTGGTA
CAGGCGATGC GCGACAGCGC AAGCATGACC ACCGGGCATT TCATGCGCAT CATGGTCTGC
GTGGTAGGCG TGCTGGCGCC GATCTGGCTG ATCGACGGGC TGCTGCTGAT GGCCTTCCCC
GAGCCATCAC CTGGGATGGA ACTGGCCATG GACAGCCTCA GCGGCTTCCT GCAACTGTTC
AGCACCGTGG TGCTGTATCG CCTGTTCATG TTGCTGGAAG GTGAAGCCAG CACCTGA
 
Protein sequence
MNPLSVLRDS LYFFRRHLPN ILQLCLPLVV VEALVTQLLY RQLGDQASPA YGMLVSLLFY 
PLYSAALILY LDTRSNGQEI AKRDLFARAL QLWPQLALLI LISSLLIMAG LALFIFPGVW
IMINLVFAEY LLVLRGRPVV QAMRDSASMT TGHFMRIMVC VVGVLAPIWL IDGLLLMAFP
EPSPGMELAM DSLSGFLQLF STVVLYRLFM LLEGEAST