Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4646 |
Symbol | |
ID | 5194947 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 5211330 |
End bp | 5211986 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640589129 |
Product | hypothetical protein |
Protein accession | YP_001269950 |
Protein GI | 148549848 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.394398 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0700701 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCCGC TGAGCGTTTT GCGCGACTCC TTGTACTTCT TCCGCCGTCA CCTGCCAAAC ATCCTGCAGC TGTGCCTGCC GCTGGTGGTG GTGGAAGCCC TGGTCACCCA ATTGCTGTAC CGGCAGCTGG GCGACCAGGC ATCACCGGCC TACGGCATGC TGGTCAGCCT GTTGTTCTAC CCGCTGTACA GCGCAGCCCT GATCCTGTAC CTGGACACGC GCAGCAACGG CCAGGAAATC GCCAAGCGCG ACCTGTTCGC CCGCGCCCTG CAGCTGTGGC CGCAACTGGC CCTGCTGATC CTGATCAGCT CGCTACTGAT CATGGCCGGC CTTGCGCTGT TCATCTTCCC GGGGGTGTGG ATCATGATCA ACCTGGTGTT CGCCGAGTAC CTGCTGGTGC TGCGCGGCCG GCCGGTGGTA CAGGCGATGC GCGACAGCGC AAGCATGACC ACCGGGCATT TCATGCGCAT CATGGTCTGC GTGGTAGGCG TGCTGGCGCC GATCTGGCTG ATCGACGGGC TGCTGCTGAT GGCCTTCCCC GAGCCATCAC CTGGGATGGA ACTGGCCATG GACAGCCTCA GCGGCTTCCT GCAACTGTTC AGCACCGTGG TGCTGTATCG CCTGTTCATG TTGCTGGAAG GTGAAGCCAG CACCTGA
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Protein sequence | MNPLSVLRDS LYFFRRHLPN ILQLCLPLVV VEALVTQLLY RQLGDQASPA YGMLVSLLFY PLYSAALILY LDTRSNGQEI AKRDLFARAL QLWPQLALLI LISSLLIMAG LALFIFPGVW IMINLVFAEY LLVLRGRPVV QAMRDSASMT TGHFMRIMVC VVGVLAPIWL IDGLLLMAFP EPSPGMELAM DSLSGFLQLF STVVLYRLFM LLEGEAST
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