| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4643 |
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| Symbol | |
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| ID | 5193040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5209118 |
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| End bp | 5209753 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640589126 |
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| Product | DNA polymerase III, epsilon subunit |
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| Protein accession | YP_001269947 |
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| Protein GI | 148549845 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0222434 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAACGTA TCGCTGTCAT CGACTTTGAA ACCACCGGCA TTTCCCCCGG TACCGGCTGC
CGTGCCACCG AGGTGGCGGT GGTAATGCTC GAGGGTGGGC GCATTGTCGA GCGCTACCAG
AGCCTGATGA ACGCTGGCGT GCCGGTGCCG GCCTTCGTCG CAGGGCTGAC CGGCATCACC
ACCGCCATGC TGCGCAGTGC GCCGCCGGTG GACAAGGTGA TGAACGAGGT GGCCGAGTTC
GTCGGCGGCA CCCCATTGTT GGCGCACAAC GCTGCTTTCG ACCAGAAGTT CTGGGACTAC
GAGCTGAGCC GTATTGGCCG CAGCCGCAGC CAGCCCTTCG CGTGTTCCCT GTTGCTGTCA
CGGCGCCTGC TGCCCGCCGC GCCGAACCAC AAGCTGGGCA CTTTGACACG CTGGGCTGGG
TTGCCAGACA CGGGGACCGC GCACCGGGCC ATGGCCGATG CCGAAATGGC CGCCAACCTG
CTGCAGCATC TGGCGGGTGT GTTGCGCCAG GACCACGGGG TTCAGCAACT GTCGCACGAG
CTGCTTTGCC GGCTGCAGAA GACCCCGGCT GCGAAAGTGC GCGAAGCGCT GGCCAAGTAC
GGTCAGGGGC TGGCAGGTGA TCGTCCCAGG CGATAA
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| Protein sequence | MERIAVIDFE TTGISPGTGC RATEVAVVML EGGRIVERYQ SLMNAGVPVP AFVAGLTGIT
TAMLRSAPPV DKVMNEVAEF VGGTPLLAHN AAFDQKFWDY ELSRIGRSRS QPFACSLLLS
RRLLPAAPNH KLGTLTRWAG LPDTGTAHRA MADAEMAANL LQHLAGVLRQ DHGVQQLSHE
LLCRLQKTPA AKVREALAKY GQGLAGDRPR R
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