| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4641 |
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| Symbol | |
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| ID | 5194392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5206692 |
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| End bp | 5208023 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640589124 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001269945 |
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| Protein GI | 148549843 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00424195 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0145877 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTCG CCAAACTCGG CCTGATCGAA CCGCTGCTGC GCACGCTGCA GCAACTGGAC
TACACCACCC CGACCCCGGT GCAGGCCAAA GCCATCCCCG CCGTGCTGGC CGGCCGCGAC
CTGATGGCCG CAGCCCAGAC CGGTACCGGC AAGACCGCAG GCTTTGCCCT GCCTGTGCTG
CAGCGCCTGG CGCTGGAGGG CGAGAAGGTG GCCAGCAACT CGATCCGCGC CTTGGTGCTG
GTGCCCACTC GCGAGCTGGC CGAGCAGGTG CACAACAACG TGCGCGAATA CGCCGAGAAC
CTGCCGCTGA GTACTTACGC GGTGTATGGC GGGGTCAGTA TCAACCCACA GATGATGCGC
CTGCGCCGGG GTGTCGACCT GCTGGTGGCT ACCCCTGGCC GCTTGCTCGA CCTGTTCCGG
CAGAACGCCG TGAAGTTCAA CCAGGTGCAG ACCCTGGTGC TGGATGAAGC CGACCGCATG
CTGGACCTGG GCTTTGCCGA AGAGCTGCAG TCGGTGTATG CGGCACTGCC GCGCAAGCGC
CAGACGCTGC TGTTTTCCGC CACCTTCTCC GATCAGATTC GCATGCTGGC GGGGCTGGCG
CTAAATGACC CGCTCAGTAT CGAAGTGAGC CCGCGCAACG CCACGGCCAC CAGCGTCAAG
CAGTGGCTGG TGCCTGTGGA CAAGAAGCGC AAGGCCGACC TGTTCTGCCA CCTGCTGCGC
AAGCAGCGCT GGAAGCAGGT GCTGGTGTTC GCCAAGACCC GCAATGGCGT CGATCAGCTG
GTGGAGCGCT TGCTGGCCGA AGGCGTGAAT GCCGACGGCA TCCACGGTGA TCGCCCACAG
GCGACCCGCC AGCGTGCGCT GGACAGCTTC AAGGCCCGTG AGGTGCAAGT GCTGGTGGCG
ACCGATGTGG CGGCCCGCGG CCTGGATATC GATGACTTGC CGCTGGTCGT CAACCTTGAC
CTGCCGATCG TTGCCGAAGA CTACGTGCAC CGCATCGGGC GTACCGGGCG GGCGGGCAAC
AAGGGCGAGG CGATTTCGCT GGTGTGTGCG GATGAAGTGC AACTGCTGGC GGCTATCGAG
GTGCTGACCC GGCAGACCCT GCCGCGTCAT GAAGAGCCGG ATTTCATCCC CGAGCACCGG
GTGCCGATGA CCGATGCCAG TGGGCAGGTT ATCAAGAAAC CGAAGAAGCC CAAGAAGCCG
AAAGAAAACA GCGCCAAGCG CGGGCTGGGG CGCTGGATGG ACAGCACTGA AGCCGGCAGT
GCGGAACCGG CGGTGAAGGC TGTACGCAAG GTGCCGAGCT TCAATGGTGG GCCGCGCAAG
CGCAAGCCTT GA
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| Protein sequence | MNFAKLGLIE PLLRTLQQLD YTTPTPVQAK AIPAVLAGRD LMAAAQTGTG KTAGFALPVL
QRLALEGEKV ASNSIRALVL VPTRELAEQV HNNVREYAEN LPLSTYAVYG GVSINPQMMR
LRRGVDLLVA TPGRLLDLFR QNAVKFNQVQ TLVLDEADRM LDLGFAEELQ SVYAALPRKR
QTLLFSATFS DQIRMLAGLA LNDPLSIEVS PRNATATSVK QWLVPVDKKR KADLFCHLLR
KQRWKQVLVF AKTRNGVDQL VERLLAEGVN ADGIHGDRPQ ATRQRALDSF KAREVQVLVA
TDVAARGLDI DDLPLVVNLD LPIVAEDYVH RIGRTGRAGN KGEAISLVCA DEVQLLAAIE
VLTRQTLPRH EEPDFIPEHR VPMTDASGQV IKKPKKPKKP KENSAKRGLG RWMDSTEAGS
AEPAVKAVRK VPSFNGGPRK RKP
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