| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4614 |
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| Symbol | |
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| ID | 5194277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5166459 |
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| End bp | 5168831 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640589097 |
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| Product | EcoEI R domain-containing protein |
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| Protein accession | YP_001269918 |
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| Protein GI | 148549816 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4096] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000837819 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACAAGA ATTCACTGAC TGAGCGCGAC ATCTGCAGCA AATACATCAC ACCGGCCATC
ACCGCGGCGG GCTGGGATTT GCACAAGCAG GTTCGTGAGG AAGTCAGCTT TACCAAGGGG
CGCATCATCG TCCGTGGCAA GCTGCACAGC CGAGGCGAAT CGCGCCGCGC CGACTACATC
CTGTATCACC AGGCCAACCT GCCGCTGGCG GTTATTGAGG CCAAGGACAA CAAGCACGCT
CTCGGCGCCG GCATGCAGCA GGCGCTCGGT TATGCCGAGG CGCTGGATGT GCCGTTCGTG
TTCTCCAGCA ACGGTGACGG TTTTCTCTTC CATGATCGCA GTGGCACCGG CGCGCAGAAG
GAAACCGAGC TGAGCCTGGA GCAGTTCCCC AGTCCCGAGG AGCTGTGGCA GCGCTACTGC
CAGTGGAAGG ACCTCAGCGG CGAAAGCCAG CAGAAAGCCG AAGCCCCGTA TTACGACGAC
GGCTCGGGGC GCATGCCGCG CTACTACCAG ATGAACGCCA TCAACCGTAC CGTTGAGGCC
GTGGCGCGCG GGCAGGATCG CATCCTGCTG GTCATGGCCA CCGGCACCGG CAAGACGTAC
ACTGCCTTCC AGATCATCTG GCGCTTGTGG AAGTCCGGGC AGAAGAAACG CATCCTCTTC
CTCGCCGACC GCAACATCCT CGTCGACCAG ACCAAGAACA ACGACTTCAA GCCCTTCGGC
CAGGCGATGA CCAAGATTGC CAAACGGCAG ATCGAAAAGT CCTACGAAAT CTACCTGTCG
CTGTATCAGG CCGTGACCGG CAATGAAGAA GAGAAGAATG TCTACAAGCA GTTTTCCCGC
GACTTCTTCG ACCTCGTGGT GATCGACGAA TGCCACCGAG GCAGCGCCTC CGAAGACTCG
GCCTGGCGCG AGATTCTCGA CTACTTCTCC GGTGCCACCC ACATCGGCCT GACCGCTACG
CCGAAGGAGA CCAAAGAGGT TTCCAGCATC ACCTACTTCG GTGAGCCGGT GTACAGCTAC
ACCCTCAAGC AAGGCATCGA AGATGGCTTC CTCGCCCCGT ACAAAGTGGT GCGCATCGAC
TTCGACAAAG ACCTGCAAGG CTGGCGCCCG CCCAAGGGCA CGCGCGACAA GAACGGTGAG
GTGATCGAAG ACCGCGTCTA TGACCTCAAC GACATGGACC GCGACCTGGT GATCGAGGCG
CGTACCCAGT TGGTCGCCCG CAAGGTCACC GAATACCTGA CCGCCACCGA CCCCTTTCAG
AAAACCATCA TCTTCTGCGA CGACATTGAC CACGCCGAGC GCATGCGCCA GGCCCTGGTC
AACCTCAACC CCAAGCGCGT TGAGGAAAAC CGCAAATACG TGATGCGCAT TACCGGCGAC
GACAAGGAAG GCAAGGCCGA GCTGGACAAC TTCATCAACC CCGAGTCGCG CTACCCGGTG
ATCGCCGCCA CCAGCAAACT CATGACCACT GGCGTTGATG CCCAGACCTG CAAGCTGGTG
GTGCTCGACC AGCACATCAA ATCCATGACC GAATTCAAGC AGATCATCGG TCGTGGCACC
CGTATCAACG AGGATTACGG CAAGTACTGG TTCACCATCA TGGACTTCAA GAAAGCCACC
GAACTGTTTG CCGACCCGGC CTTCGACGGG GAGCCGGTGG TAATCTACAA CCCCGAGGGC
GACTCCTCAC CGGTGCCGCC GGAAGAAACC GAGGGCGAAG AGGGTGACGT GATCGACGGT
GGCGCTGGGC CAACCGAAGG TGACGAAACC ACCGGCGGCG CTGACGACGA TGGCCGCAAG
AAGCGCGTCA AATACGTGAT CAACAACGTC GCCGTGCACG TCATTGCCGA GCGCGTGCAG
TACTACGGCC CGGACGGCAA GCTGATCACC GAATCGCTAC GCGACTACAC CCGCACCTGC
GTTAAGAAAC AGTTTGCCTC GCTGGATGAC TTCCTGCGCC GCTGGAGCGA TGCCGAACAG
AAGAAAGTCA TCATCGATGA ATTGGCCGCT CAAGGCGTGA TGTGGGAAGC CTTGGACGAC
GAAGTCTCAG CCAAGCGCGG CCAGCCGCTC GATCCGTTCG ACCTGATCTG CCATATCGCC
TTCGACCAGC CGCCGCTCAC CCGCAAGGAG CGCGCCGAGC AGGTGAAAAA ACGCAACTAC
TTCGCCAAAT ACTCCGGCGC CGCCCGCCAG GTACTGGAAG CCCTGCTCGA CAAATACGCC
GACACCGGCG TCGAGCACAT CGAAGACATC AAGATTCTTC AGCTGGCGCC ATTCAGCCAG
ATCGGTGCGC CGATTGAGCT GGTCAAGGCC TTTGGCGGCA AACCGGGCTA TCAGCAGGCC
ATTCAGGAGC TTGAGCGACA GCTCTACGGA TAA
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| Protein sequence | MDKNSLTERD ICSKYITPAI TAAGWDLHKQ VREEVSFTKG RIIVRGKLHS RGESRRADYI
LYHQANLPLA VIEAKDNKHA LGAGMQQALG YAEALDVPFV FSSNGDGFLF HDRSGTGAQK
ETELSLEQFP SPEELWQRYC QWKDLSGESQ QKAEAPYYDD GSGRMPRYYQ MNAINRTVEA
VARGQDRILL VMATGTGKTY TAFQIIWRLW KSGQKKRILF LADRNILVDQ TKNNDFKPFG
QAMTKIAKRQ IEKSYEIYLS LYQAVTGNEE EKNVYKQFSR DFFDLVVIDE CHRGSASEDS
AWREILDYFS GATHIGLTAT PKETKEVSSI TYFGEPVYSY TLKQGIEDGF LAPYKVVRID
FDKDLQGWRP PKGTRDKNGE VIEDRVYDLN DMDRDLVIEA RTQLVARKVT EYLTATDPFQ
KTIIFCDDID HAERMRQALV NLNPKRVEEN RKYVMRITGD DKEGKAELDN FINPESRYPV
IAATSKLMTT GVDAQTCKLV VLDQHIKSMT EFKQIIGRGT RINEDYGKYW FTIMDFKKAT
ELFADPAFDG EPVVIYNPEG DSSPVPPEET EGEEGDVIDG GAGPTEGDET TGGADDDGRK
KRVKYVINNV AVHVIAERVQ YYGPDGKLIT ESLRDYTRTC VKKQFASLDD FLRRWSDAEQ
KKVIIDELAA QGVMWEALDD EVSAKRGQPL DPFDLICHIA FDQPPLTRKE RAEQVKKRNY
FAKYSGAARQ VLEALLDKYA DTGVEHIEDI KILQLAPFSQ IGAPIELVKA FGGKPGYQQA
IQELERQLYG
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