| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4603 |
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| Symbol | |
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| ID | 5192845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5150616 |
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| End bp | 5153426 |
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| Gene Length | 2811 bp |
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| Protein Length | 936 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640589085 |
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| Product | D-lactate dehydrogenase (cytochrome) |
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| Protein accession | YP_001269907 |
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| Protein GI | 148549805 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0247] Fe-S oxidoreductase
[COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.52713 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0292343 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTGC CCGCCGCGTT CCTGCGTGAT GCCGAGCGCC TGATCCCCGC CGAACGCCGC
TTCGACGACC CCACCTCCAC CCTGGCCTTC GGCACCGACG CCAGCTTCTA CCGCTTGATC
CCCAAGCTGG TGGTGCGCGT CGAGTCCGAG GACGAAGTGG TCGGCCTGAT CAAACTGGCC
CAGCGCGAGC GGGTGCCGGT CACCTTCCGC GCTGCCGGCA CCAGCCTGTC TGGCCAGGCC
ATCAGCGACT CGGTGCTGAT CGTGCTCGGC GATAACTGGA ACGGCCGCGA AATCCGTCGC
CAGGGCGAGC AGATTCGCCT GCAACCCGGC GTGATCGGCG CCCAGGCCAA CGCCTGGCTG
GCCCCCTTCG GGCGCAAGAT CGGCCCCGAC CCGGCCTCGA TCAACGCCTG CAAGATCGGC
GGCATCGTCG CCAACAACGC CAGCGGCATG TGCTGCGGCA CCGCGCAGAA CACCTACCAC
ACCCTGGCGG GCCTGCGCCT GGTGCTGGCC GACGGCACCC GCCTGGACAG CGAAGACCCG
GCCAGCGTCG CCGCCTTCGA AAGCAGCCAC GCCGAGCTGC TGGAAGCACT GGCCCGCCTG
GGCCGCGAAA CCCGCGCCAA CACCGCGCTG GCCGAGCGCA TCCGGCACAA ATACCGGCTG
AAGAACACCA CCGGCCTGTC ACTGAACGCA CTGGTGGACT ACGACCAGCC GCTGGACATT
CTGCAGCACC TGCTGGTCGG CTCCGAAGGC ACCCTGGGCT TCATCAGCGC CGTCACGTAC
GACACCGTGC CCGACCACCC GCACAAGGCC AGCGCCCTGC TGGTGTTCCC CAGCGTTGAA
AGCTGCTGCC GCGCGGTACC CGTGCTCAAG CAACAGCCGG TCTCTGCCGT GGAACTGCTC
GACCGCCGCA GCCTGCGCTC GGTGCAGAAC ATGCCCGGCA TGCCGCTGTG GGTAAAAGGC
CTGTCGGACA ATGCCTGCGC CCTGCTGATC GAATCCCGCG CCGCCAGCCA GAGCCTGCTG
CACGAGCAAC TGCAGCAGAT CATGGCCTCG ATCGCCGACT TCCCGCTGGA ACAGCAGGTG
GACTTCAGCG AAGACCCGGC CGTGTACAAC CAGCTGTGGA AAATCCGCAA GGACACCTTC
CCCGCCGTCG GCGCCGTGCG CCAGACCGGC ACCACGGTCA TCATCGAAGA CGTAACCTTC
CCCGTCGAGC AACTGGCCGA AGGCGTCAAC CGCCTGATCC AGCTGTTCGA CAAGCATCAC
TATGACGAAG CGATCATTTT CGGCCACGCG CTGGAAGGCA ACCTGCACTT CGTCTTTACC
CAGGGGTTCA ACAGCGCCGA AGAAGTCGCC CGTTACCAGG CGTTCATGGA CGACGTGGCG
CAACTGGTGG CGGTGGAGTT TGGCGGCTCG CTCAAGGCCG AGCACGGCAC CGGGCGCAAC
ATGGCGCCTT TCGTGGAGCT GGAGTGGGGC CACGATGCCT ACCAGCTGAT GTGGAAGCTC
AAGCGCCTGC TCGACCCCAA CGGCATCCTC AACCCTGACG TGGTGTTGAG CGACGACCCG
GATATCCACC TGAAAAACCT CAAGCCCCTG CCTGCCGCCG ACGAAATCGT CGACAAGTGC
ATCGAGTGCG GCTTCTGCGA ACCGGTGTGC CCGTCCAAGG GCCTGACCCT CAGCCCACGC
CAGCGCATCG TCATGTGGCG TGACATCCAG GCCAAGCAGC GCGCCGGCAT CGATACCCGT
GAACTGATGC AAAGCTACCA GTACCAGGGC ATCGACACCT GCGCCGCTAC CGGCCTGTGC
GCCCAGCGCT GCCCAGTCGG CATCAACACC GGCGAGTTGG TGAAGAAACT GCGCAGCCAG
GCCGCCGACC ACGCTAAAAC CGCCGACTGG CTGGCCGAGC ATTTCCACAC TGCCCTAAGC
GGTGCGCGCC TGACCCTGAC CGCCGCCAAT ACCGCACGCA AGCTGCTAGG CGCCCCGCGC
CTGGGCCGCC TGAGTGCTTC GCTGAGCAAA GCCAGCAAAG GCCGCCTGCC CCAATGGACC
CCGGCCATGC CGCAACCGCT GCGCCCGCTG GCCTTCGGCG CCACCAGCAA CGACGCCCGC
CCCCGCGTCG TGTACCTGGC CGCCTGCGTC TCCCGGGTCA TGGGCCCGGC CTATGCCGAC
CGCGAGCAAA GCTCGCTGCT GGACAAAACC CGCGCCCTGC TGGAAAAGGC CGGTTACCAG
GTGGTGTTCC CGGACAACGC CGACAGCCTG TGCTGCGGCC AACCGTTCGC CTCCAAGGGC
TACCCCGAGC AGGCCGAACA CAAACGCCAG GAACTGATCA CCGCCCTGCT GCACGCCAGC
CGCGGCGGCC TCGACCCGAT CTACTGCGAC ACCAGCCCCT GCACCCTGCG CCTGGTGCAG
GACCTGAGCG ACACCCGGCT GGACCTGTAC GACCCGGTGC GCTTCATCCG CACCCACCTG
CTTGACCGAC TGGAGTTCAC CCCCCAGGAC GAACCGGTAG CCGTGCACGT AACCTGCAGC
ACCCAGCACC TGGGCGAAAG CCAGGCCTTG ATCGACCTGG CGCGGCGCTG CAGTAAACAG
GTGGTGATCC CGGAAGGCAT TCACTGCTGC GGGTTTGCCG GTGACAAAGG CTTTACCACC
CCCGAGTTGA ACGCCCACTC GCTGCGCAGC CTGAAGGACG CCGTGCAGTA TTGCAGCGAA
GGTATTTCCA CCAGCCGCAC CTGCGAGATA GGCCTGTCGA GCCACAGCGG CATCGACTAC
CACGGCCTGG TGTACCTGGT AGACCGCGTC ACCCGGCCAC GCAGCCTCTA A
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| Protein sequence | MSLPAAFLRD AERLIPAERR FDDPTSTLAF GTDASFYRLI PKLVVRVESE DEVVGLIKLA
QRERVPVTFR AAGTSLSGQA ISDSVLIVLG DNWNGREIRR QGEQIRLQPG VIGAQANAWL
APFGRKIGPD PASINACKIG GIVANNASGM CCGTAQNTYH TLAGLRLVLA DGTRLDSEDP
ASVAAFESSH AELLEALARL GRETRANTAL AERIRHKYRL KNTTGLSLNA LVDYDQPLDI
LQHLLVGSEG TLGFISAVTY DTVPDHPHKA SALLVFPSVE SCCRAVPVLK QQPVSAVELL
DRRSLRSVQN MPGMPLWVKG LSDNACALLI ESRAASQSLL HEQLQQIMAS IADFPLEQQV
DFSEDPAVYN QLWKIRKDTF PAVGAVRQTG TTVIIEDVTF PVEQLAEGVN RLIQLFDKHH
YDEAIIFGHA LEGNLHFVFT QGFNSAEEVA RYQAFMDDVA QLVAVEFGGS LKAEHGTGRN
MAPFVELEWG HDAYQLMWKL KRLLDPNGIL NPDVVLSDDP DIHLKNLKPL PAADEIVDKC
IECGFCEPVC PSKGLTLSPR QRIVMWRDIQ AKQRAGIDTR ELMQSYQYQG IDTCAATGLC
AQRCPVGINT GELVKKLRSQ AADHAKTADW LAEHFHTALS GARLTLTAAN TARKLLGAPR
LGRLSASLSK ASKGRLPQWT PAMPQPLRPL AFGATSNDAR PRVVYLAACV SRVMGPAYAD
REQSSLLDKT RALLEKAGYQ VVFPDNADSL CCGQPFASKG YPEQAEHKRQ ELITALLHAS
RGGLDPIYCD TSPCTLRLVQ DLSDTRLDLY DPVRFIRTHL LDRLEFTPQD EPVAVHVTCS
TQHLGESQAL IDLARRCSKQ VVIPEGIHCC GFAGDKGFTT PELNAHSLRS LKDAVQYCSE
GISTSRTCEI GLSSHSGIDY HGLVYLVDRV TRPRSL
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