Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4600 |
Symbol | |
ID | 5190383 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 5146638 |
End bp | 5147405 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640589082 |
Product | GntR domain-containing protein |
Protein accession | YP_001269904 |
Protein GI | 148549802 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.487729 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0576497 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTTTTG ATCAGGTACG CCAACGGCGC CTGTCCGACG ACATTGTCGA TCGGCTGGAA GGGATGATTC TGGAAGGCAC GCTGACCTCG GGGCAGCGGC TGCCGGCCGA GCGCGTCCTG GCCGAGCAGT TTGGTGTGTC CCGCCCGTCA CTGCGTGAGG CGATCCAGAA GCTGGTGGCC AAGGGGTTGT TGGTCAGCCG TCAGGGCGGG GGCAATTTTG TGGCGGAATC GTTGGGGTCC ACCTTCAGCG ACCCGTTGCT GCAGTTGCTC GAGCACAGTG CCGAAGCGCA GCGTGACCTG CTCGAGTTCC GCCATACCCT GGAGGCGTCC TGCGCCTATT ACGCTGCCCA GCGTGCCACC GAGCCGGACC GGGCGCGGTT GAAGGCGGCC TTCGATACGC TGCAGGACTG CTATGCCAGG GTCGATGAGG TGACCCGTGC GGAAGAGGGC GCGGCTGATG CGCGCTTCCA CCTGGCGATC GCCGAGGCCA GCCATAACGC GGTGTTGCTG CACACCATCC GGGGTTTGTT CGACCTGCTC AAACGCAACG TGGTGACCAA CATCGGGGGC ATGTACCAGC AGCGCACCGA AACCCGGGAC ATGCTGATCA GCCAGCACCG GGAACTGTAC CTGGCGATTG TCGAGGGCAG GGCGGAGGAT GCGCGTGAGG TGTCCAGCCG GCACATTTTG TATGTGCAGG AGGTGCTGCA TGAGGCGCAC GAAGAAGCGC AGCGGGTGGC ACGGGCGGAG CGGCGCAGCG GGCGCTGA
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Protein sequence | MVFDQVRQRR LSDDIVDRLE GMILEGTLTS GQRLPAERVL AEQFGVSRPS LREAIQKLVA KGLLVSRQGG GNFVAESLGS TFSDPLLQLL EHSAEAQRDL LEFRHTLEAS CAYYAAQRAT EPDRARLKAA FDTLQDCYAR VDEVTRAEEG AADARFHLAI AEASHNAVLL HTIRGLFDLL KRNVVTNIGG MYQQRTETRD MLISQHRELY LAIVEGRAED AREVSSRHIL YVQEVLHEAH EEAQRVARAE RRSGR
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