Gene Pput_4598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4598 
Symbol 
ID5191391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5145353 
End bp5145787 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content59% 
IMG OID640589080 
Productcyclase/dehydrase 
Protein accessionYP_001269902 
Protein GI148549800 
COG category[I] Lipid transport and metabolism 
COG ID[COG2867] Oligoketide cyclase/lipid transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.762203 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.138792 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACCC ATATTCAACG CTCCGCCCTG CTGCCATACC CCGCCCAGGC GCTTTACGAT 
CTGGTCAACG ATGTGGCCAG CTACCCTGAG TTTTTGCCGT GGTGCTCGGC CTCGACGGTG
ATCGAAACCA GCGATACACA CATGCGTGCC AAGCTCGAAG TGGCCAAGGG GGGCATGAGC
CAGCACTTCG TGACGCGTAA CGTGCTGGTG CCGGGGCAGT CCATCGAGAT GAACCTCGAA
GAAGGGCCAT TCACCCAGCT GCATGGTGTT TGGGTGTTCA AGCCGCTGGG TGAAAAAGCC
TGCAAGATCA GCCTGGACCT GTCCTTCGAT TACGCCGGGC CGATTGTGCG CGCCACGTTG
GGCCCGCTAT TCAATCAGGC GGCGAATACG CTGGTCGATG CGTTCTGCCA GCGTGCCAAG
CAATTGAATG CCTGA
 
Protein sequence
MTTHIQRSAL LPYPAQALYD LVNDVASYPE FLPWCSASTV IETSDTHMRA KLEVAKGGMS 
QHFVTRNVLV PGQSIEMNLE EGPFTQLHGV WVFKPLGEKA CKISLDLSFD YAGPIVRATL
GPLFNQAANT LVDAFCQRAK QLNA