| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4593 |
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| Symbol | dnaK |
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| ID | 5193802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5139701 |
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| End bp | 5141536 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640589075 |
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| Product | molecular chaperone DnaK |
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| Protein accession | YP_001269897 |
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| Protein GI | 148549795 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0443] Molecular chaperone |
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| TIGRFAM ID | [TIGR02350] chaperone protein DnaK |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.419127 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTAAAA TCATCGGTAT CGACCTGGGG ACCACCAACT CGTGCGTCTC CATTCTGGAA
AACGGTAACG TCAAAGTCAT CGAAAACGCC GAAGGTGCGC GTACTACCCC TTCGATCGTG
GCCTACGCCA ACGATGGCGA AATCCTGGTT GGCCAGTCGG CCAAGCGCCA GGCTGTCACC
AACCCGCACA ACACCCTGTT CGCAGTGAAG CGCCTGATTG GCCGCCGCTT CGAAGAAGAT
GTCGTGCAGA AAGACATCAA GCTGGTGCCG TACAAGATCG TCAAGGCGAA CAACGGTGAC
GCCTGGGTCG AGGCTGCTGG CAAGGAAATG GCTCCGCCGC AGATCAGCGC CGAAGTCCTG
AAGAAAATGA AGAAGACCGC CGAAGACTAC CTCGGCGAGC CGGTCACCGA AGCGGTCATC
ACCGTTCCGG CCTACTTCAA CGACAGCCAG CGTCAGGCTA CCAAAGACGC CGGCCGCATC
GCTGGCCTGG ACGTAAAACG CATCATCAAC GAGCCGACTG CCGCTGCACT GGCGTACGGC
ATGGACAAGG CCAAGGGCGA CCACACCGTC ATCGTTTATG ACCTGGGTGG TGGTACCTTC
GACGTTTCGG TCATCGAAAT CGCCGAAGTC GACGGTGAGC ACCAGTTCGA AGTACTGGCT
ACCAACGGCG ACACCTTCCT GGGTGGCGAA GACTTCGACA TGCGCCTGAT CGACTACCTT
GTCGACGAGT TCAAGAAAGA GTCGGGCATG GACCTGAAGA ACGATCCTCT GGCCCTGCAG
CGCCTGAAAG AAGCCGCAGA AAAAGCCAAG ATCGAGCTGT CGTCCGCTCA GTCGACCGAC
GTCAACCTGC CGTACATCAC TGCAGATGCC ACCGGTCCTA AGCACCTGAA CGTGAAGATC
TCCCGCGCCA AGCTGGAGTC GCTGGTCGAA GACCTGGTCA AGCGTACCAT CGAGCCTTGC
CGCATTGCCC TGAAAGACGC CGGCATCGAC GCCAGCAAGA TCGACGACGT GATCCTGGTC
GGCGGTCAGA CCCGCATGCC GCTGGTGCAG AAAGAAGTGG CCGACTTCTT CGGTAAAGAA
GCGCGCAAGG ACGTGAACCC GGACGAAGCC GTCGCCATGG GTGCTGCCAT CCAGGGTGCG
GTACTGGCCG GTGACGTAAA AGACGTACTG CTGCTGGACG TCAGCCCGCT GACCCTGGGT
ATCGAAACCA TGGGTGGCGT GATGACCGCG CTGATCGAGA AGAACACCAC CATCCCGACC
AAGAAGTCGC AGGTGTTCTC GACTGCTGAC GACAACCAGA GCGCCGTGAC CATTCACGTG
CTGCAAGGTG AGCGTAAGCA GGCTGCGCAG AACAAGTCGC TGGGCAAGTT CGACCTGGCT
GACATTCCGC CAGCACCGCG TGGCGTGCCG CAAATCGAAG TGACCTTCGA CATCGACGCC
AACGGCATCC TGCACGTAGG TGCGAAAGAC AAGGCCACCG GCAAGACTCA GTCGATCGTG
ATCAAGGCCA ACTCCGGCCT GTCGGACGAA GAGATCGAGC GCATGGTGCG TGACGCCGAG
GCCAACGCCG AGGAAGACCG CAAGTTCGAA GAGCTGGCGG CTGCCCGTAA CCAGGGTGAC
GCGCTGGTGC ACTCGACCCG CAAGATGGTC GCTGACGCAG GTGACAAGGT TACCGCTGAA
GAGAAAACCG CCATCGAGGC CGCCGTTGTT GCCCTGGAAG CCGCTGTCAA AGGCGACGAC
AAGGCTGCCA TCGACGCCAA GGTTGAAGAG CTGTCCAAGG TCTCTGCCCC GGTTGCCCAG
AAGATGTACG CCGAGCAGTC GGCTGAACAG CCTTAG
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| Protein sequence | MGKIIGIDLG TTNSCVSILE NGNVKVIENA EGARTTPSIV AYANDGEILV GQSAKRQAVT
NPHNTLFAVK RLIGRRFEED VVQKDIKLVP YKIVKANNGD AWVEAAGKEM APPQISAEVL
KKMKKTAEDY LGEPVTEAVI TVPAYFNDSQ RQATKDAGRI AGLDVKRIIN EPTAAALAYG
MDKAKGDHTV IVYDLGGGTF DVSVIEIAEV DGEHQFEVLA TNGDTFLGGE DFDMRLIDYL
VDEFKKESGM DLKNDPLALQ RLKEAAEKAK IELSSAQSTD VNLPYITADA TGPKHLNVKI
SRAKLESLVE DLVKRTIEPC RIALKDAGID ASKIDDVILV GGQTRMPLVQ KEVADFFGKE
ARKDVNPDEA VAMGAAIQGA VLAGDVKDVL LLDVSPLTLG IETMGGVMTA LIEKNTTIPT
KKSQVFSTAD DNQSAVTIHV LQGERKQAAQ NKSLGKFDLA DIPPAPRGVP QIEVTFDIDA
NGILHVGAKD KATGKTQSIV IKANSGLSDE EIERMVRDAE ANAEEDRKFE ELAAARNQGD
ALVHSTRKMV ADAGDKVTAE EKTAIEAAVV ALEAAVKGDD KAAIDAKVEE LSKVSAPVAQ
KMYAEQSAEQ P
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