Gene Pput_4588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4588 
SymbolgreA 
ID5192141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5132203 
End bp5132685 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content58% 
IMG OID640589070 
Producttranscription elongation factor GreA 
Protein accessionYP_001269892 
Protein GI148549790 
COG category[K] Transcription 
COG ID[COG0782] Transcription elongation factor 
TIGRFAM ID[TIGR01462] transcription elongation factor GreA 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATTA CCAAATACCC GATGACCGTC CAGGGCGCTC GCGCCCTGGA AGAAGAGCAC 
CTGTTCCTGA GCAAGACCGA GCGCCCGCGC CTGAGTCAGG CCATTGGTGA AGCGCGTGAG
CTGGGTGACC TCAAGGAAAA CGCCGAATAC CATGCCGCCC GTGAGGAGCA GGGCATGGTC
GAAGCGCGTA TCCGTGATAT CGAAGGCCGT CTGCAGAATT CGGTGGTCAT CGATGTGACC
ACCATCCCTC ACACCGGCAA GGTGATTTTC GGTACCACCG TGGTACTGGC CAACACCGAA
ACCGATGAAG AGGTGACCTA CCAGATCGTT GGCGAGGATG AAGCTGACGT GAAGCAGGGC
AAGCTGTCGA GCGGCGCACC CATTGCCCGT GCCATCATCG GCAAGGAAGA AGGTGATACT
GTCGTCGTCA AGACGCCTAG TGGCACGGTC GAGTACGAGA TTGTCGAAGT CAAGCACATC
TGA
 
Protein sequence
MSITKYPMTV QGARALEEEH LFLSKTERPR LSQAIGEARE LGDLKENAEY HAAREEQGMV 
EARIRDIEGR LQNSVVIDVT TIPHTGKVIF GTTVVLANTE TDEEVTYQIV GEDEADVKQG
KLSSGAPIAR AIIGKEEGDT VVVKTPSGTV EYEIVEVKHI