Gene Pput_4586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4586 
Symbol 
ID5192716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5131455 
End bp5131763 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content57% 
IMG OID640589068 
Producthypothetical protein 
Protein accessionYP_001269890 
Protein GI148549788 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1534] Predicted RNA-binding protein containing KH domain, possibly ribosomal protein 
TIGRFAM ID[TIGR00253] putative RNA-binding protein, YhbY family 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTCA ATAACGAGCA GAAGAAGCAA TACAAGTCCA TTGGTCATGA CCTGAAGCCG 
GTCCTGATCG TTGCTGGCAA CGGTTTGAAT GAAGGCGTGA TCGCCGAACT GGAGCGCGCA
CTGGTCGACC ATGAGCTGAT CAAGGTCGAG ATTCGCTCGG AAGACCGCGA AGAACGCGCC
GAGACCATCG CCGAGCTGTG CAAGGCCGGC CGTGCCGAGC TGGTGCAGAC CATCGGCAAG
AAAGCCCTGA TCTACCGCAA GAACCCACAG CCGAACAAGC AGCTGTCCAA CATCCACCGT
TACAAGTAA
 
Protein sequence
MPLNNEQKKQ YKSIGHDLKP VLIVAGNGLN EGVIAELERA LVDHELIKVE IRSEDREERA 
ETIAELCKAG RAELVQTIGK KALIYRKNPQ PNKQLSNIHR YK