Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4585 |
Symbol | |
ID | 5194981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 5130729 |
End bp | 5131352 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640589067 |
Product | ribosomal RNA methyltransferase RrmJ/FtsJ |
Protein accession | YP_001269889 |
Protein GI | 148549787 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0293] 23S rRNA methylase |
TIGRFAM ID | [TIGR00438] cell division protein FtsJ |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTACAAC GTTCCAAAAG CAGCGCAAAC TGGCTGCGAG AGCATTTCAA CGACCCTTTT GTGAAGCAGG CGCAGAAGGA TGGGTATCGC TCGCGTGCGA GCTACAAACT GCTGGAGATC CAGGAGAAGG ACCGCCTTAT CCGCCCAGGC ATGAGCGTGA TCGACCTCGG CGCGGCCCCT GGTGGCTGGT CCCAGGTGAC CAGTCGTCTG ATTGGTGGCC AGGGTCGCCT GATCGCTTCC GACATTCTGG AAATGGACTC GATCGCCGAC GTGACCTTCA TTCAGGGTGA CTTCACCCAC GACGAAGTGC TGCAGCGCAT TCTCGAAGCG GTCGGCGATT CGCATGTAGA CCTTGTGATT TCCGACATGG CCCCCAATAT GAGTGGTACG CCCGCGGTGG ACATTCCGCG TGCCATGTTC CTCTGCGAGC TGGCCCTCGA TCTGGCGACC CGCGTACTCA AGCCCGGCGG CGACTTCCTG ATCAAGATTT TCCAGGGCGA AGGTTTTGAC GTGTACCTGA AGGACGTGCG CAGCAAGTTC GACAAGGTGC AAATGCGCAA GCCGTCGTCG TCACGGGACC GTTCCCGCGA GCAATACCTG TTGGGCAGGG GCTTCAAAGG GTAA
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Protein sequence | MVQRSKSSAN WLREHFNDPF VKQAQKDGYR SRASYKLLEI QEKDRLIRPG MSVIDLGAAP GGWSQVTSRL IGGQGRLIAS DILEMDSIAD VTFIQGDFTH DEVLQRILEA VGDSHVDLVI SDMAPNMSGT PAVDIPRAMF LCELALDLAT RVLKPGGDFL IKIFQGEGFD VYLKDVRSKF DKVQMRKPSS SRDRSREQYL LGRGFKG
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