| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4577 |
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| Symbol | infB |
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| ID | 5190352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5120196 |
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| End bp | 5122736 |
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| Gene Length | 2541 bp |
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| Protein Length | 846 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640589057 |
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| Product | translation initiation factor IF-2 |
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| Protein accession | YP_001269881 |
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| Protein GI | 148549779 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.126639 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAAG TCACGGTGAA AGAACTGGCC CAAGAGGTCG AGGCACCGGT AGAGCGCCTG
CTGCAGCAGA TGCGTGAGGC AGGTCTGCCG CACACCGACG CCGGTCAGGT AGTGACCGAC
AATGAGAAGC AGACCCTGCT GACTCATTTG AAAAGCAGCC ACAAGAGCAA GGCGGAAGAG
CCGCGCAAGA TTACCTTGCA GCGCAAAACC ACCAGCACCC TGCGTGTCGC CGGTAGCAAG
AGCATCAGCG TAGAAGTACG CAAGAAGAAA GTTTTCGTGC AGCGCAGCCC TGAAGAAATC
CAGGCTGAGC AGAAGCGTGA GCTGGAAGAG CGCCGCGCGG CTGAAAATGC CGCTCGCGAC
AAGGTCGAGG CCGAAGTTCG CCAGCGCAAC GAAGAGCAGG CTCGCCGTCA GGCGGCCGGC
TCCACCGCCG CCGCCCCTGC GCCTGCTGCC AAGCCAGAGC CGGCTCCTGC CGCTGCTCCG
GTCGCTGCTC CGGCCCCGGT AGTCGCAGAC GCCCCGGCCT CTGAAGACGC CGCAGCCCGT
GCTGCCGAGC GCAAGAAAGA CGAGACCCGT CGCAACGAAA GCCGTACCCG TGATGACGAC
CGTCGTCGTG GCGAAGCGCC TCGTGTGTCG ATCAAGGTCA AGGTCAAGGA GAAGGAAAAG
GCGCCGACTC CGCGTGCTGC TCCGCGCACT ACCGACGAAG AGAGCGATGG CGCTCGTCGT
GGCCGTGGTG GCAAGAGCAA GCTGAAAAAG CGTAATCAGC ACGGCTTCCA GAACCCGACC
GGCCCCGTCA TCCGTGACGT GACCATCGGC GAGACCATCA CCGTCTCCGA GCTGGCCAAC
CAGATGTCCG TCAAGGGCGC TGAAGTGGTC AAGTTCATGT TCAAGATGGG GACCCCGGTC
ACCATCAACC AGGTGCTCGA CCAGGAAACC GCTCAGCTGA TCGCCGAAGA GCTGGGCCAC
AAGGTCACGC TGGTCAGCGA CACCGCCCTG GAAGACTCCC TGGCCGAATC GCTGAAGTTC
GAAGGCCAGA CCGAGTCGCG TGCGCCGGTG GTTACCGTCA TGGGTCACGT TGACCATGGT
AAGACCTCGC TGCTCGACTA CATCCGTCGT GCCAAGGTTG CCGCTGGCGA AGCCGGTGGT
ATCACCCAGC ACATCGGTGC CTACCACGTG GAAACCGACC GCGGCATGGT CACCTTCCTC
GATACCCCTG GTCACGCTGC GTTCACCCAG ATGCGTGCCC GTGGTGCCAA GGCGACCGAC
ATTGTCATCC TGGTGGTGGC GGCGGACGAC GGTGTGATGC CGCAAACCCG CGAAGCCGTT
CAGCATGCCA AGGCAGCCGG TGTTCCGCTG GTCGTTGCAG TGAACAAGAT CGACAAGCCA
GGTGCTGACC TCGATCGCAT CCGTAACGAG CTGTCCGTCG AAGGCGTTAC CTCCGAGGAC
TGGGGTGGAG ACACGCCGTT CGTCAAGGTT TCGGCGAAGA TGGGTACCGG TGTCGACGAG
CTGCTCGAAG CCGTTCTGCT GCAGGCCGAG ATCCTCGAAC TGACCGCTAC CCCAACCGCG
CCAGGTCGTG GTGTGGTTGT CGAATCGCGC CTGGACAAGG GCCGTGGCCC GGTGGCGACC
ATCCTGGTTC AGGACGGTAC CCTGCGTCAG GGCGACATGG TCCTGTGCGG CTCCAACTAT
GGCCGCGTAC GTGCCATGCT CGATGAGAAC GGCAAGCCTG TGAAGGAAGC TGGCCCGTCG
ATCCCGGTCG AAATCCTCGG CCTGGACGGT ACTCCGGAAG CCGGTGACGA GCTGTCCGTG
GTTGCCGACG AGAAGAAAGC CCGTGAAGTT GCCCTGTTCC GTCAAGGCAA GTATCGCGAG
GTCAAGCTGG CCCGTGCTCA CGCCGGCAAG CTGGAAAACA TCTTCGAGAC CATGGGTCAG
GAAGAGAAGA AAACCCTCAA CATCGTTCTC AAGACCGATG TGCGTGGTTC TCTGGAAGCG
CTGCAGGGTT CGCTCGGCGG CCTGGGCAAC GACGAAGTGC AAGTGCGCGT GATTGGTGGT
GGCGTCGGTG GTATCACCGA GAGCGACGCC AACCTGGCGC TGGCTTCGAA TGCAGTACTG
TTCGGCTTCA ACGTGCGTGC CGATGCCGGT GCGCGCAAGA TCGTCGAGCA GGAAGGTCTG
GATATGCGTT ATTACAACGT GATCTACGAC ATCATCGAAG ACGTCAAGAA GGCCCTGACC
GGCATGCTCG GCAGCGATGT TCGCGAGAAC ATCCTGGGTG TCGCCGAAGT GCGTGACGTG
TTCCGTTCGC CGAAGTTCGG CGCCATCGCT GGCTGTATGG TCATCGAGGG TACCGTGTAC
CGCAACCGTC CGATTCGCGT ACTGCGTGAT GACGTTGTGA TCTTCGAAGG CGAGCTGGAA
TCGCTGCGTC GCTTCAAGGA CGATGCTTCC GAAGTCCGTT CGGGCATGGA GTGCGGTATT
GGCGTCAAGA GCTACAACGA CGTCAAGGTC GGCGACAAGA TCGAAGTCTT CGAGAAAGTC
CAGGTGGCTC GTACCCTTTA A
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| Protein sequence | MTQVTVKELA QEVEAPVERL LQQMREAGLP HTDAGQVVTD NEKQTLLTHL KSSHKSKAEE
PRKITLQRKT TSTLRVAGSK SISVEVRKKK VFVQRSPEEI QAEQKRELEE RRAAENAARD
KVEAEVRQRN EEQARRQAAG STAAAPAPAA KPEPAPAAAP VAAPAPVVAD APASEDAAAR
AAERKKDETR RNESRTRDDD RRRGEAPRVS IKVKVKEKEK APTPRAAPRT TDEESDGARR
GRGGKSKLKK RNQHGFQNPT GPVIRDVTIG ETITVSELAN QMSVKGAEVV KFMFKMGTPV
TINQVLDQET AQLIAEELGH KVTLVSDTAL EDSLAESLKF EGQTESRAPV VTVMGHVDHG
KTSLLDYIRR AKVAAGEAGG ITQHIGAYHV ETDRGMVTFL DTPGHAAFTQ MRARGAKATD
IVILVVAADD GVMPQTREAV QHAKAAGVPL VVAVNKIDKP GADLDRIRNE LSVEGVTSED
WGGDTPFVKV SAKMGTGVDE LLEAVLLQAE ILELTATPTA PGRGVVVESR LDKGRGPVAT
ILVQDGTLRQ GDMVLCGSNY GRVRAMLDEN GKPVKEAGPS IPVEILGLDG TPEAGDELSV
VADEKKAREV ALFRQGKYRE VKLARAHAGK LENIFETMGQ EEKKTLNIVL KTDVRGSLEA
LQGSLGGLGN DEVQVRVIGG GVGGITESDA NLALASNAVL FGFNVRADAG ARKIVEQEGL
DMRYYNVIYD IIEDVKKALT GMLGSDVREN ILGVAEVRDV FRSPKFGAIA GCMVIEGTVY
RNRPIRVLRD DVVIFEGELE SLRRFKDDAS EVRSGMECGI GVKSYNDVKV GDKIEVFEKV
QVARTL
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