| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4575 |
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| Symbol | truB |
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| ID | 5193969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5118760 |
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| End bp | 5119677 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640589055 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_001269879 |
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| Protein GI | 148549777 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0935427 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCCAGG TCAAACGTAT CCGCCGCAAT ATCAGCGGCA TCATCCTGCT CGACAAGCCG
CTGGGCTTCA CGTCCAATGC CGCCTTGCAG AAAGTGCGTT GGCTGCTGAA CGCGGAAAAG
GCCGGCCATA CCGGTAGCCT CGACCCGCTG GCGACCGGCG TGTTGCCGCT GTGCTTCGGT
GAAGCGACCA AGTTTTCGCA GTACTTGCTG GATTCCGACA AGGGCTACGA AACCGTCATG
CAGATGGGGC AGACTACCAA CACCGGCGAT GCCGAGGGTG AGGTGCTGCA GACCCGCGAC
GTGACCGTTG GTCGCGCCGA CATCGAAGCG CTGCTGCCCC GTTTTCGCGG CCCGATCAGC
CAGATACCGC CTATGTACTC GGCGCTCAAG CGTGACGGCC AGCCGCTGTA CAAACTGGCA
CGTGCAGGAG AGGTAGTGGA GCGCGAGGCG CGTTCTGTTA CTATTAACCG CTTGGAGTTG
CTCGAGTGCG AAGGCACCCG TGCACGGTTG AGCGTAGGAT GCAGCAAAGG CACCTATATC
CGCACGCTGG TGGAGGATAT CGGTGAAGCC CTTGGTTGCG GCGCCTATGT CGCCGAGCTG
CGCAGGACCC AGGCAGGGCC CTTTGCGCTG GCACAGACGG TCACCCTCGA GGAACTCGAA
CAGGCCCATG CCGAAGGTGG CAACGAAGCG CTCGACCGCT TCCTGATGCC ATCGGACAGC
GGGCTGCAGG ACTGGCCGTT GGTCAGCCTG TCGGAACACA GTGCGTTCTA CTGGCTGCAT
GGCCAGGCGG TACGCGCGCC GGACGCGCCA CAATTTGGCA TGGTGCGGGT ACAGGATCAC
AATGCACGCT TCATCGGTAT CGGTGAGGTG AGCGAAGACG GGCGCATTGC GCCGCGTCGG
CTGATTCGGT CGGAATGA
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| Protein sequence | MAQVKRIRRN ISGIILLDKP LGFTSNAALQ KVRWLLNAEK AGHTGSLDPL ATGVLPLCFG
EATKFSQYLL DSDKGYETVM QMGQTTNTGD AEGEVLQTRD VTVGRADIEA LLPRFRGPIS
QIPPMYSALK RDGQPLYKLA RAGEVVEREA RSVTINRLEL LECEGTRARL SVGCSKGTYI
RTLVEDIGEA LGCGAYVAEL RRTQAGPFAL AQTVTLEELE QAHAEGGNEA LDRFLMPSDS
GLQDWPLVSL SEHSAFYWLH GQAVRAPDAP QFGMVRVQDH NARFIGIGEV SEDGRIAPRR
LIRSE
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